prot_L-elsbetiae_contig1769.5003.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1769.5003.1
Unique Nameprot_L-elsbetiae_contig1769.5003.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length855
Homology
BLAST of mRNA_L-elsbetiae_contig1769.5003.1 vs. uniprot
Match: A0A6H5K102_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K102_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 8.120e-107
Identity = 418/871 (47.99%), Postives = 458/871 (52.58%), Query Frame = 0
Query:    1 MTKEDISKYLDATDPVAGAAASEAAAAAIKALAAPTLADGASGAAAKDARVDAALANLSSHYPVVTPAASVYEVLGFAAQARHAKNYADLLAGASDSA--------------------------------------------GGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDKQATSPGGGEGVADGKSGXXXXXXXXXXXXXXXXXXXXXXXF--------------------------TAADTSSSPLEQASRSLSPVPEPPEEATATAPFTGAGAEERGSPREPAGDADNRSGDSAGEQAAIAAATAKPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------IKLPVSPCLGLATERPFVFAATLADDVLEWLHSEGAGATERRGSEFFVGISSGDEEE-----EGEGAGETGGGEGAPGGDSDPAAVVARAVEALLRGGGAGSLHARDVDAAAKACSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPVRVPPASFAALATLLRASLDQAASDREFLQARNCLVTAALYAVDGAEYVSWLREQSG------GGGDGSARSVSSAVMADSELVSAAERLDEXXXXXXXXXXXXXXXXXXXXXXXXXXEVAVAPGGGEMA--GVDYLLLRELRRHSVWATIELWEVSISDSVVMAMEGGGARAERWLPGPVVVGLKECFGEEVAGRQLDVKLGQLAFFGHSMLACGLPPSEVRSLLRKCSSLAMEIALPDLEALMGCLNSFVMGPRPGAA-------AHPRSRSVSS 774
            +TKEDIS YLDATDPVAGAAASEAAAAAIKAL APTLA GA G+AA+DA++DAALA LSSHYPVVTPAASVYEVLGFAAQARHAKNY DLLAGASD+                                             G                           XXXXXXXXXXXXXXXXXXXXXX                  DK  +S    EG+     G      XXXXXXXXXXXXXXXXX                            A   +++P                  TA  P          +P            DS    AA+       P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       + + VSPCL LA+ RP VFAATLADDVLE L +EGAGAT+RR S                  EG G G+  GG        DPA  VARAVEALL G    ++ A +VDAAA+ACS                                                            XX      F+PVR+ PASFAALA LLRASLDQAASDREFLQARNCLVTA L+AV+G +Y+SWLREQ G      G           AVMA+SELVSAA +LDE                          +V    G GE       YLLLRELRRH VWA IELWEVS+SDSVVMAMEGGG RAERWL    +  + E FGE+ A RQLDVKLGQLAF GHSML CG+PPSEVRSL+RKCSSLAME    DLEAL   LN+FV+GPRP A         HPRSRS  S
Sbjct:  466 ITKEDISMYLDATDPVAGAAASEAAAAAIKALGAPTLAGGARGSAAQDAKMDAALAKLSSHYPVVTPAASVYEVLGFAAQARHAKNYKDLLAGASDAGVDGGGVGGVDGGSGNGEIVDAEGRASQRPLPCTGACAPASEQRGGAADGANAPEGSSGSNVAGSSSGNGENTXXXXXXXXXXXXXXXXXXXXXXSSGANAEKATPSPDGVVNDKPMSSSSRREGLDGSVIGGVAAAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAATLAAATPXXXXXXXXXXXXXXXXXPTAATP----------APXPXXXXXXXXEEDSQPPPAAVDPQGEDSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEVAVTVSPCLALASRRPSVFAATLADDVLESLRAEGAGATDRRRSXXXXXXXXXXXXXXXXXXEGPGVGDDRGG--------DPATAVARAVEALLTGXXXRTMKAEEVDAAAEACS-------------------RSPSSSNRLLLALCQHACPSTTTTASGDNQGPSATTGSGSTXXGSGPRGFAPVRLQPASFAALARLLRASLDQAASDREFLQARNCLVTAGLFAVEGDDYLSWLREQHGSQQGKSGXXXXXXXXXIPAVMANSELVSAAGKLDEVSALSSSAAAAPAA------------DVPSGEGAGEAEEEAAGYLLLRELRRHPVWAAIELWEVSMSDSVVMAMEGGGERAERWLTRDTLDAMGERFGEDAASRQLDVKLGQLAFLGHSMLTCGVPPSEVRSLVRKCSSLAMETPPRDLEALTATLNTFVVGPRPAAXXXXXXXPGHPRSRSEYS 1287          
BLAST of mRNA_L-elsbetiae_contig1769.5003.1 vs. uniprot
Match: D8LEI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI7_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 2.190e-84
Identity = 333/772 (43.13%), Postives = 358/772 (46.37%), Query Frame = 0
Query:    1 MTKEDISKYLDATDPVAGAAASEAAAAAIKALAAPTLADGASGAAAKDARVDAALANLSSHYPVVTPAASVYEVLGFAAQARHAKNYADLLAGASDSAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDKQATSPGGGEGVADGKSGXXXXXXXXXXXXXXXXXXXXXXXFTAADTSSSPLEQASRSLSPVPEPPEEATATAPFTGAGAEERGSPREPAGDADNRSGDSAGEQAAIAAATAKPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLPVSPCLGLATERPFVFAATLADDVLEWLHSEGAGATERRGSEFFVGISSGDEEEEGEGAGETGGGEGAPGGDSDPAAVVARAVEALLRGGGAGSLHARDVDAAAKACSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPVRVPPASFAALATLLRASLDQAASDREFLQARNCLVTAALYAVDGAEYVSWLREQSGG----GGDGSARSVSSAVMADSELVSAAERLDEXXXXXXXXXXXXXXXXXXXXXXXXXXEVAVAPGGGEMAGVD-----YLLLRELRRHSVWATIELWEVSISDSVVMAMEGGGARAERWLPGPVVVGLKECFGEEVAGRQLDVKLGQLAFFGHSMLACGLPPSEVRSLLRKCSSLAMEIALPDLEALMGCLNSFVMGPRPGA 763
            +TKEDIS YLDATDPVAGAAASEAAAAAIKAL APTLA GA GAAA DA++DAALA LSSHYPVVTPAASVYEVLGFAAQARHAKNY DLLAGASD+  G XXXXXXXX                                                                    G A+G+                                             V +PP       P   AGA                                                                                            G                    L ++GAGATERRGSE                                                   ++ A  VDAAA+ACS XXXXXXXXXXXXX  XXXXXXXX                XXXXXXXXXX                   +PVR+ PASF ALA LLRASLDQAASDREFLQARNCLVTA L+AVDG  YVSWLREQ G      G          VMAD+ELVSAA +L  XXXXXXXXXXXXX               A  PGG      D     YLLLRELRRH VWA IELWEVS+SDSVVMAMEGGGARAERWL    +  ++E FGE+ A RQLDVKLGQLAF GHSMLACG+PPSE RSL+RKCSSLAMEI   DLEAL   LN+FVMGPRP A
Sbjct:  473 ITKEDISMYLDATDPVAGAAASEAAAAAIKALGAPTLAGGARGAAAMDAKMDAALAKLSSHYPVVTPAASVYEVLGFAAQARHAKNYKDLLAGASDAGLGXXXXXXXXX--------------------------------------------------------------------GDAEGR---------------------------------------------VSQPP------IPCPDAGA--------------------------------------------------------------------------------------------GXXXXXXXXXXXXXXXXXXXSLRADGAGATERRGSELXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXTMKADQVDAAAEACSXXXXXXXXXXXXXXQHXXXXXXXXASGDNQGPSATTGSGSXXXXXXXXXX-------------------APVRLQPASFVALARLLRASLDQAASDREFLQARNCLVTAGLFAVDGGNYVSWLREQDGSQQGKSGXXXXXXXXXXVMADNELVSAARKLXXXXXXXXXXXXXXXP-------------AADVPGGEGAGDADEEAAGYLLLRELRRHPVWAAIELWEVSMSDSVVMAMEGGGARAERWLTRDTLDAMRERFGEDAASRQLDVKLGQLAFLGHSMLACGVPPSEGRSLVRKCSSLAMEIPSRDLEALTATLNTFVMGPRPAA 998          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1769.5003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K102_9PHAE8.120e-10747.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEI7_ECTSI2.190e-8443.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1769contigL-elsbetiae_contig1769:18296..23700 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1769.5003.1mRNA_L-elsbetiae_contig1769.5003.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1769 18284..23811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1769.5003.1 ID=prot_L-elsbetiae_contig1769.5003.1|Name=mRNA_L-elsbetiae_contig1769.5003.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=855bp
MTKEDISKYLDATDPVAGAAASEAAAAAIKALAAPTLADGASGAAAKDAR
VDAALANLSSHYPVVTPAASVYEVLGFAAQARHAKNYADLLAGASDSAGG
DHGGSGSGGSGEKKGGGEASAAAAAAAAAVAAAAAVMEAPPLPPSAASSG
DGASGAVVGPPPAAAKDKQATSPGGGEGVADGKSGREGSEGIGGFGGVAS
AFAAAAAAFTAADTSSSPLEQASRSLSPVPEPPEEATATAPFTGAGAEER
GSPREPAGDADNRSGDSAGEQAAIAAATAKPPAPETQSSISSRSSSTGDG
STGVGAAKSTAAAAAAAAAAAAAATTTSTSIKLPVSPCLGLATERPFVFA
ATLADDVLEWLHSEGAGATERRGSEFFVGISSGDEEEEGEGAGETGGGEG
APGGDSDPAAVVARAVEALLRGGGAGSLHARDVDAAAKACSDSSSSSNRL
LLALCRNACASCGGGGGGGGGGTPARSSGSVQDPSAAAEPTAAGEGGGGG
GGGGGGGGGFSPVRVPPASFAALATLLRASLDQAASDREFLQARNCLVTA
ALYAVDGAEYVSWLREQSGGGGDGSARSVSSAVMADSELVSAAERLDEAA
AAAAAAAAAAAAPTGVSSGGSAGGEVAVAPGGGEMAGVDYLLLRELRRHS
VWATIELWEVSISDSVVMAMEGGGARAERWLPGPVVVGLKECFGEEVAGR
QLDVKLGQLAFFGHSMLACGLPPSEVRSLLRKCSSLAMEIALPDLEALMG
CLNSFVMGPRPGAAAHPRSRSVSSAGRGQEAAPGGEGGGPPPPAEGDLST
AVGGGEGDGGDGGGDDGARGGPGSCGGGGDSGSSEGSESSYASESGLPRD
EVAP*
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