prot_L-elsbetiae_contig9983.18908.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9983.18908.1
Unique Nameprot_L-elsbetiae_contig9983.18908.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length131
Homology
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BLAST of mRNA_L-elsbetiae_contig9983.18908.1 vs. uniprot
Match: D7G2K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K4_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 2.130e-33
Identity = 87/131 (66.41%), Postives = 96/131 (73.28%), Query Frame = 0 
Query:    1 SHTPLAGIPPCIICTQ-GKPMLVIANHKLEGKSASEPKPLLVLRKILVDVXXXXXXXXXXXXXXXXXXXXTAEGEPGGYAPRRPQRQQRVEYRVVGRVTRKTIFKTRPKPLIRKLGDGGGHGGGSTARSCM 130
            S  PL+G P   + ++ GK MLVI+NHKLEGK+ASEPKPLLVLRK++VDV      XXXXXXXXXXXXXX             P   QRVEYRVVGRV RKTIFKTRPKPLI+KLG GGG  GGSTARSCM
Sbjct:   10 SKDPLSGQPLGSMTSENGKAMLVISNHKLEGKAASEPKPLLVLRKVVVDVNDENCGXXXXXXXXXXXXXXXXXXXXXXXXXXPPA--QRVEYRVVGRVARKTIFKTRPKPLIKKLGSGGGRAGGSTARSCM 138
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9983.18908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2K4_ECTSI2.130e-3366.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018607Chromosome transmission fidelity protein 8PFAMPF09696Ctf8coord: 17..110
e-value: 2.5E-7
score: 31.1
NoneNo IPR availablePANTHERPTHR28605FAMILY NOT NAMEDcoord: 15..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9983contigL-elsbetiae_contig9983:3684..4139 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9983.18908.1mRNA_L-elsbetiae_contig9983.18908.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9983 3684..4139 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9983.18908.1 ID=prot_L-elsbetiae_contig9983.18908.1|Name=mRNA_L-elsbetiae_contig9983.18908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp
SHTPLAGIPPCIICTQGKPMLVIANHKLEGKSASEPKPLLVLRKILVDVD
DENSNGGGGNNGDGDGSGATAEGEPGGYAPRRPQRQQRVEYRVVGRVTRK
TIFKTRPKPLIRKLGDGGGHGGGSTARSCM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018607Ctf8