prot_L-elsbetiae_contig9981.18906.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9981.18906.1
Unique Nameprot_L-elsbetiae_contig9981.18906.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length279
Homology
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Match: A0A6H5K6R3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6R3_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 5.370e-88
Identity = 178/289 (61.59%), Postives = 191/289 (66.09%), Query Frame = 0
Query:    1 MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWKELKKQQQAGGKSFHTSAATFAALQPSC---YADSGTGTLSPAVVAASVDGVAGVGIHSE--------------SPLSFGWATGEAAXXXXXXXXXXXXXXSNRFAAASSTPTQSDSEAVDGGIAARLSQMSLLGGCDGGQQQARSTGAPGAPPLSAFPPLHAVLASHLALLGPAACSRIGLRIGAE 272
            MTVRVRLQR GRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWKEL+K+Q AGGK FHTSAA F ALQP      +DS   TL     +AS DG    GI +                PLS  W TG                 ++R   A ST T S  + + GGIA  LS+MSL     G QQ              A+ PL AVLASHL+LLGPAACS IGL + AE
Sbjct:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWKELQKKQ-AGGKGFHTSAACFNALQPGAGEPASDSPPRTL----FSASDDGELSDGIATRRPSSAVSQSPPLETGPLSSWWGTGAERE-------------THRNGEAVST-TASGPDELGGGIALDLSRMSLTERSAGDQQ--------------AWSPLRAVLASHLSLLGPAACSVIGLLVDAE 256          
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Match: A0A7S1VML7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VML7_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.580e-40
Identity = 63/85 (74.12%), Postives = 79/85 (92.94%), Query Frame = 0
Query:    1 MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPP 85
            M VR+RLQRFG+RNRPFYR+V A+ RAPRDGKF+E++GTYNP+ATR+G+KE+  K DRI+YW+SVGAQPSDRV+W+LG+FGILPP
Sbjct:    1 MVVRLRLQRFGKRNRPFYRMVAANVRAPRDGKFLEIIGTYNPIATRAGLKEIRLKTDRIKYWLSVGAQPSDRVSWILGKFGILPP 85          
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Match: B8BU89_THAPS (RT16, ribosomal protein 16 mitochondrial small ribosomal subunit (Fragment) n=3 Tax=Bacillariophyta TaxID=2836 RepID=B8BU89_THAPS)

HSP 1 Score: 142 bits (359), Expect = 8.290e-40
Identity = 64/85 (75.29%), Postives = 76/85 (89.41%), Query Frame = 0
Query:    1 MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPP 85
            M VR+RLQRFGR + PFYR+V ADSRAPRDGKF+E+VGTYNP+A  +G+KE+  K DR+RYWISVGAQPSDRVAW+LG+FGILPP
Sbjct:    1 MVVRLRLQRFGRTHSPFYRMVAADSRAPRDGKFLEIVGTYNPIANNAGIKEIRLKADRLRYWISVGAQPSDRVAWILGKFGILPP 85          
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Match: A0A7S3PWJ7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWJ7_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.340e-39
Identity = 65/101 (64.36%), Postives = 85/101 (84.16%), Query Frame = 0
Query:    1 MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKE 101
            M VR+RLQRFGR +RPFYR+V ADSRAPRDGKF+E+VGTYNP+AT+ G+KE+  K DR++YW+ VGAQPSDRV+W+LG+FG+LPP    V+  K  +P+K+
Sbjct:    1 MPVRLRLQRFGRTHRPFYRMVAADSRAPRDGKFLEIVGTYNPIATKEGIKEIRLKTDRLKYWLGVGAQPSDRVSWILGKFGVLPPPPPRVSLQKM-IPKKD 100          
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Match: A0A6U0J4Z2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0J4Z2_9STRA)

HSP 1 Score: 141 bits (355), Expect = 5.690e-39
Identity = 66/101 (65.35%), Postives = 83/101 (82.18%), Query Frame = 0
Query:    1 MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKE 101
            M VR+RLQRFGR + PFYR+V AD RAPRDG+F+ELVGTYNP+A  +G+KE+  K DR+RYW+SVGAQPSDRVAW+LG+FG+LPP   P    ++ VPRK+
Sbjct:    1 MVVRLRLQRFGRTHAPFYRMVAADGRAPRDGRFLELVGTYNPIANSAGIKEIRLKTDRLRYWLSVGAQPSDRVAWILGKFGVLPPPP-PRYSVEKMVPRKD 100          
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Match: A0A7S1H3T9_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H3T9_9STRA)

HSP 1 Score: 139 bits (349), Expect = 4.260e-38
Identity = 60/85 (70.59%), Postives = 77/85 (90.59%), Query Frame = 0
Query:    1 MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPP 85
            M VR+RLQRFGR++ PFYR+V AD RAPRDGKF+E+VGTYNP+A++ G+KE+  K DR++YW++VGAQPSDRVAW+LG+FGILPP
Sbjct:    1 MVVRLRLQRFGRKHLPFYRMVAADHRAPRDGKFLEVVGTYNPIASKDGIKEIRLKTDRLKYWLAVGAQPSDRVAWILGKFGILPP 85          
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Match: A0A7S2KAU0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAU0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.480e-38
Identity = 66/103 (64.08%), Postives = 84/103 (81.55%), Query Frame = 0
Query:    1 MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWK 103
            M VR+RLQRFGR + PFYR+V AD RA RDGKF+E++GTYNP+A + G+KEV  K DR +YW+SVGAQPSDRV WLLG+FGILPP  VP  R ++++P++E K
Sbjct:   13 MVVRLRLQRFGRTHTPFYRIVAADHRARRDGKFLEILGTYNPIANKDGIKEVRLKSDRFKYWLSVGAQPSDRVGWLLGKFGILPPPPVP-HRPQRSIPKEERK 114          
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Match: A0A7S1ZG56_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZG56_TRICV)

HSP 1 Score: 139 bits (349), Expect = 4.520e-38
Identity = 62/85 (72.94%), Postives = 75/85 (88.24%), Query Frame = 0
Query:    1 MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPP 85
            M VR+RLQRFG++  PFYR+V A+SRAPRDGKF E+VGTYNP+A  SG+KE+  K DR+RYW+SVGAQPSDRVAW+LG+FGILPP
Sbjct:    1 MVVRLRLQRFGQKKLPFYRMVAANSRAPRDGKFFEIVGTYNPIANASGIKEIRLKTDRLRYWLSVGAQPSDRVAWILGKFGILPP 85          
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Match: A0A7S4NGP0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NGP0_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.800e-37
Identity = 63/107 (58.88%), Postives = 88/107 (82.24%), Query Frame = 0
Query:    1 MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRKEWKELKK 107
            M VR+RLQRFG+ + PFYR+V A+S+APRDGKF+E++GTYNP+A + G+KE+  K DR++YW+SVGAQPSDRVAW+LG+FGILPP   P    ++ +P+K+ +E +K
Sbjct:    1 MVVRLRLQRFGKTHSPFYRMVAANSKAPRDGKFLEILGTYNPMANKHGIKEIRLKTDRLKYWVSVGAQPSDRVAWVLGKFGILPPPP-PRYSPQRMIPKKDREEQEK 106          
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Match: A0A7S2V6U9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6U9_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.090e-37
Identity = 61/85 (71.76%), Postives = 77/85 (90.59%), Query Frame = 0
Query:    1 MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVKEVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPP 85
            M VR+RLQRFGR ++PFYR+V ADSR+PR+GKF+E+VGTYNP+A++ GVKE+ FK DR++YW+ VGAQPSDRVAWLLGQ G+LPP
Sbjct:    1 MVVRMRLQRFGRTHQPFYRIVTADSRSPRNGKFLEIVGTYNPIASKDGVKELHFKFDRVKYWLGVGAQPSDRVAWLLGQSGLLPP 85          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9981.18906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6R3_9PHAE5.370e-8861.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1VML7_9STRA3.580e-4074.12Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
B8BU89_THAPS8.290e-4075.29RT16, ribosomal protein 16 mitochondrial small rib... [more]
A0A7S3PWJ7_9STRA1.340e-3964.36Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6U0J4Z2_9STRA5.690e-3965.35Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S1H3T9_9STRA4.260e-3870.59Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2KAU0_9STRA4.480e-3864.08Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1ZG56_TRICV4.520e-3872.94Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4NGP0_9STRA1.800e-3758.88Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2V6U9_9STRA2.090e-3771.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 1..121
e-value: 9.9E-41
score: 140.4
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 3..102
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 9..70
e-value: 1.5E-26
score: 92.2
IPR000307Ribosomal protein S16TIGRFAMTIGR00002TIGR00002coord: 3..82
e-value: 4.9E-31
score: 104.6
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 1..110
IPR000307Ribosomal protein S16HAMAPMF_00385Ribosomal_S16coord: 2..80
score: 24.366
NoneNo IPR availablePANTHERPTHR12919:SF2037S RIBOSOMAL PROTEIN S16, MITOCHONDRIALcoord: 1..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9981contigL-elsbetiae_contig9981:1446..3982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9981.18906.1mRNA_L-elsbetiae_contig9981.18906.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9981 1446..3982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9981.18906.1 ID=prot_L-elsbetiae_contig9981.18906.1|Name=mRNA_L-elsbetiae_contig9981.18906.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=279bp
MTVRVRLQRFGRRNRPFYRVVVADSRAPRDGKFIELVGTYNPLATRSGVK
EVTFKVDRIRYWISVGAQPSDRVAWLLGQFGILPPKVVPVARTKQTVPRK
EWKELKKQQQAGGKSFHTSAATFAALQPSCYADSGTGTLSPAVVAASVDG
VAGVGIHSESPLSFGWATGEAAAAAAANVDGNSNDSSNRFAAASSTPTQS
DSEAVDGGIAARLSQMSLLGGCDGGQQQARSTGAPGAPPLSAFPPLHAVL
ASHLALLGPAACSRIGLRIGAEGPRGTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023803Ribosomal_S16_dom_sf
IPR000307Ribosomal_S16