prot_L-elsbetiae_contig9980.18905.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9980.18905.1
Unique Nameprot_L-elsbetiae_contig9980.18905.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length374
Homology
BLAST of mRNA_L-elsbetiae_contig9980.18905.1 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 1.210e-66
Identity = 198/393 (50.38%), Postives = 232/393 (59.03%), Query Frame = 0
Query:    8 CALLGL-MRLSQVRSI-CADVDLYFGSMTSGTNEIDLGQTTRLACPKDEDTE----IIIASGQDVIVNSGIDFQEPVQFKNIRFTVEEGASLAFSNFV-RFGPNN---QDIFTHAFRVNEGASVTFLGKFRASKIP---SAFLNFGSIEFKTKSFFNNNSQVFSLNAXXXXXXXXXXXINNDFHGIENSST-GFVRFSKKATFIANGATFDDTSGCGLENNGGTVVFRGDTIFQDHKCREAAALYNDGTMRFYGKAIFNDNVNSDVEGPGSGLGQGGGLRSWNGGDLIFKGDVEFNRNTGDVGGGMGVVXXXXXXXXXXXXXXXXXXXXXGGFAVINEGSVTFTKPDLVTASGNNAASD---------CSFGYVSEGG--TLVGLD--DVCDE 373
            CALL L +  S VRS  C D+D YFG ++S T EIDLG   R+ CP ++D E    I I SG+ + V S   F   V+F N+RF VEEGASL F   V R GPN+   +      F V EG S+TF GKFRAS++    S F N GSIEFK  S FNNN  VF  N XXXXXXXXXXX         N     FVRFSK ATFI N   FD   GC ++N GGT +FR D +F DH C E AA+ N G MRFYGKA F+DN N      G G+       S   GDL+FK  V+FNRNT + GGG+ V  XXXXXXXXXXXXXXXXXXXX    V  +GSVTF KP++V  S N   ++         CS  YV EG   T+VG D  D+C E
Sbjct:    9 CALLALALMASTVRSQECDDIDAYFGDVSSVT-EIDLGTIIRVDCPSNDDAEELPYITIESGKTLTVKSEESF---VRFVNLRFIVEEGASLIFDMPVTRVGPNSGQSEGAGDFVFDVAEGGSLTFNGKFRASQVSNVRSVFYNRGSIEFKDDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXNDGEDSFVRFSKTATFIDNAGFFDGAWGCAIDN-GGTAIFRDDAVFSDHDCDEGAAVSNTGKMRFYGKAYFSDNRN--YRDTGGGVLNRAVYDSDQAGDLVFKAAVQFNRNTAEYGGGIAVTGXXXXXXXXXXXXXXXXXXXXXXXXVTGDGSVTFEKPEVVRISDNTLLANEYNPDPITGCSLAYV-EGNETTVVGFDFDDICQE 393          
BLAST of mRNA_L-elsbetiae_contig9980.18905.1 vs. uniprot
Match: A0A6H5KB90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB90_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 7.120e-24
Identity = 81/167 (48.50%), Postives = 97/167 (58.08%), Query Frame = 0
Query:    8 CALLGLMRL-SQVRSI-CADVDLYFGSMTSGTNEIDLGQTTRLACPKDEDTE----IIIASGQDVIVNSGIDFQEPVQFKNIRFTVEEGASLAFSNFV-RFGPNN----QDIFTHAFRVNEGASVTFLGKFRASKI---PSAFLNFGSIEFKTKSFFNNNSQVFSLN 160
            CALL L  + S VRS  C D+D YFG ++S T EIDLG   R+ CP  +D E    I I SG+ + V S   F   V+F N+RF VEEGASL F   V R GPN+    +      F V EG S+TF GKFR+S++    S F N GSIEFK  S FNNN  VF  N
Sbjct:    9 CALLALALIASTVRSQECDDIDAYFGDVSSVT-EIDLGTIIRVDCPSTDDGEELPYITIESGKTLAVKSEESF---VRFVNLRFIVEEGASLIFDMPVTRVGPNSVVDPESASDFVFDVAEGGSLTFNGKFRSSQVFNVRSVFYNRGSIEFKDDSLFNNNGNVFRNN 171          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9980.18905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHY2_ECTSI1.210e-6650.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB90_9PHAE7.120e-2448.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..373
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.624

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9980contigL-elsbetiae_contig9980:412..6784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9980.18905.1mRNA_L-elsbetiae_contig9980.18905.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9980 219..6808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9980.18905.1 ID=prot_L-elsbetiae_contig9980.18905.1|Name=mRNA_L-elsbetiae_contig9980.18905.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=374bp
MKACGALCALLGLMRLSQVRSICADVDLYFGSMTSGTNEIDLGQTTRLAC
PKDEDTEIIIASGQDVIVNSGIDFQEPVQFKNIRFTVEEGASLAFSNFVR
FGPNNQDIFTHAFRVNEGASVTFLGKFRASKIPSAFLNFGSIEFKTKSFF
NNNSQVFSLNAGTIKFRGSSKFINNDFHGIENSSTGFVRFSKKATFIANG
ATFDDTSGCGLENNGGTVVFRGDTIFQDHKCREAAALYNDGTMRFYGKAI
FNDNVNSDVEGPGSGLGQGGGLRSWNGGDLIFKGDVEFNRNTGDVGGGMG
VVGGDITFREAVSFTDNEATMNGGGFAVINEGSVTFTKPDLVTASGNNAA
SDCSFGYVSEGGTLVGLDDVCDE*
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