prot_L-elsbetiae_contig992.18856.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig992.18856.1
Unique Nameprot_L-elsbetiae_contig992.18856.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length677
Homology
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BLAST of mRNA_L-elsbetiae_contig992.18856.1 vs. uniprot
Match: A0A6H5K892_9PHAE (APG6 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K892_9PHAE)

HSP 1 Score: 531 bits (1368), Expect = 3.650e-177
Identity = 399/768 (51.95%), Postives = 439/768 (57.16%), Query Frame = 0 
Query:    8 IDPGMSSVTSPPRVSPPPPIPSPLDWERIGGPSCCVCRQSYV--AEAGEE-----------ASXXXXXXXXTNGPSVRRGGPRVGGEESFVVLPDSTPVLSEDYFALSRNQNNGLASSGTGTTVSSIAPADTAGIAGGVRLAG----------------GGSSLAPGSELLLESRYSGYGGGSGALGFGVGGWTGS-FGAGSSMLDSIVQISHAGLSDNVRRESLLYDLSKRPVRRPSSGGXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEH------DPTLCCHCYASLLEQIDEDSRLADREALGYRDFIELLDGVSEGDRSG-DSTEPTAASPPTTAAETE----------------------------AGDKQAAEGVDNSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSPSPFARALRIAQQTSVQLRTELRSLETQRGALCARGSEAWAALSELAFARGVLGDECRELLQVSREVAENAARLSGRSALSELFSIRHMDGFPSINGYRLGRAPDDKRRLHWNEINAAWGE--------------------------------LASGDNGSGLSHEGYEGQGSRGPESSTSSPAXXXXXXXXXXXXXXAHDLFSTXXXXXXXXXRSA--DEKQRHLAAVRAFLACSAESIAFLERRVLERRLEGEMTAGAACVAWSNQVGDGVPYKQTEDAIGGVSIGALKSRAAWKAWLCQLVKNLEWAVGAASSLCVA 676
            + P +SS+ S P          PLDWER+ GPSCCVC Q+Y+  AE  +E             XXXXXXXX                    VLPDS PVLSEDYF L+RNQ +             +A        GG RLAG                GGSSL PGSELL ES +S Y G    +GFG GGWTGS FGAGSSMLDSIVQISHAGLSDNVRRESLLYD+S+RP RR  +G                                    E        DPTLCCHCYASLLEQIDEDSRLADREAL YRDF+E L G+   + +G +S  PTA   P    + E                            A D    EG D                                    XXXXXXXXXXXXXXX      + SPFA+ALR+AQ+TSVQLR ELRSLETQRGALCARGSEAWAALSELA+ARGVL DECRELLQ SREVAENAA LS RSALSELFSIRH+DGFPSING+RLGRAPDDKRRLHWNEINAAWGE                                LASGDN  G S E   G+   GPE + ++                AHDLFST    XXXXXRS   +E  RHLAAVRAFLACSAE +AFLERRVLERRLEGE++AGAACVAWS+    GVPYKQTEDA+GGVSIGALK + +WK WLCQLVKNLEWAVGAASSLCVA
Sbjct:    1 MQPSLSSLPSSPV--------DPLDWERVIGPSCCVCGQAYIPAAEVDDEHITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPDSKPVLSEDYFTLARNQRHXXXXXXXXXXXXXLA--------GGARLAGARSQQASGPGIGRSVGGGSSLPPGSELL-ESGFSAYDGS--VVGFG-GGWTGSGFGAGSSMLDSIVQISHAGLSDNVRRESLLYDMSQRPARRFRAGEQKLPASKDGASAAQVDGGDDERGGRLSQRQPADSEEAEGQEESDDPTLCCHCYASLLEQIDEDSRLADREALAYRDFVETLSGIIISEDNGLESAGPTA---PGRRRKAEGFPAXXXXXXXXXXXXXXXXXXXXXGEGAADSTRREGSDRQ--EHARKERGRSLSSGTSPASSALAPSPGTVNVQXXXXXXXXXXXXXXXGSAAGPAASPFAQALRMAQETSVQLRRELRSLETQRGALCARGSEAWAALSELAYARGVLEDECRELLQASREVAENAAHLSERSALSELFSIRHVDGFPSINGFRLGRAPDDKRRLHWNEINAAWGEAVLLVRCVSNAVDFRSKRFRLVPLNCTSRVIELASGDNSGGRSQEDGVGRRGHGPEPTAATSVVVVC----------AHDLFSTGGGGXXXXXRSGSGEENLRHLAAVRAFLACSAEVMAFLERRVLERRLEGEVSAGAACVAWSDV---GVPYKQTEDAVGGVSIGALKGQGSWKPWLCQLVKNLEWAVGAASSLCVA 730
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig992.18856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K892_9PHAE3.650e-17751.95APG6 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 398..418
NoneNo IPR availablePANTHERPTHR12768:SF4BECLIN-1coord: 256..513
IPR040455Atg6, BARA domainPFAMPF04111APG6coord: 469..670
e-value: 3.3E-11
score: 43.5
IPR038274Atg6/Beclin C-terminal domain superfamilyGENE3D1.10.418.40coord: 443..515
e-value: 1.4E-11
score: 46.3
IPR007243Atg6/BeclinPANTHERPTHR12768BECLIN 1coord: 256..513

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig992contigL-elsbetiae_contig992:1938..5283 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig992.18856.1mRNA_L-elsbetiae_contig992.18856.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig992 1935..5283 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig992.18856.1 ID=prot_L-elsbetiae_contig992.18856.1|Name=mRNA_L-elsbetiae_contig992.18856.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=677bp
MRRSRPEIDPGMSSVTSPPRVSPPPPIPSPLDWERIGGPSCCVCRQSYVA
EAGEEASSSNNKNNNTNGPSVRRGGPRVGGEESFVVLPDSTPVLSEDYFA
LSRNQNNGLASSGTGTTVSSIAPADTAGIAGGVRLAGGGSSLAPGSELLL
ESRYSGYGGGSGALGFGVGGWTGSFGAGSSMLDSIVQISHAGLSDNVRRE
SLLYDLSKRPVRRPSSGGGAGSVGEAAGGDAPTPAAAAGGGGGGGGGGDN
DDGEEHDPTLCCHCYASLLEQIDEDSRLADREALGYRDFIELLDGVSEGD
RSGDSTEPTAASPPTTAAETEAGDKQAAEGVDNSPAAGSAAGGGSRGGQD
ERSGGTGSNPPPPSGRAPQDEDTMDAAAAAAAAAAAAESSPSPFARALRI
AQQTSVQLRTELRSLETQRGALCARGSEAWAALSELAFARGVLGDECREL
LQVSREVAENAARLSGRSALSELFSIRHMDGFPSINGYRLGRAPDDKRRL
HWNEINAAWGELASGDNGSGLSHEGYEGQGSRGPESSTSSPAAAATATAT
SVVVVCAHDLFSTGSGGGGGSGRSADEKQRHLAAVRAFLACSAESIAFLE
RRVLERRLEGEMTAGAACVAWSNQVGDGVPYKQTEDAIGGVSIGALKSRA
AWKAWLCQLVKNLEWAVGAASSLCVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040455Atg6_BARA
IPR038274Atg6/Beclin_C_sf
IPR007243Atg6/Beclin