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Homology
BLAST of mRNA_L-elsbetiae_contig989.18829.1 vs. uniprot
Match: D8LG06_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG06_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 1.090e-7 Identity = 52/130 (40.00%), Postives = 68/130 (52.31%), Query Frame = 0
Query: 2 LPEYATTVVLVLSCAVGSGNAFTG-PISSSPRPRSGPKESWHARVPPRPT-RGAARGVRQQQTPPTHLHCSTRSADRDASQTRAVTNVGR---HAISKPKLQAALREAGKSGSWRKALGILDEMKERGIV 126
LPE + +LV +C+ G+ F G PIS S + H+ +P P GAA GV H R+A + T VT G ++ + KLQAALREA +G WR+ALGILDEMKE G+V
Sbjct: 14 LPE-SLLALLVFACSARGGSGFVGGPISGPMSKGSAARGPSHSAIPAHPACGGAAGGVYHSSPMRRHARSCCRAAPKLGEATAVVTMQGAARANSRAARKLQAALREAATTGKWREALGILDEMKEGGVV 142
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 66..208
e-value: 3.2E-28
score: 100.3
coord: 659..764
e-value: 6.2E-25
score: 89.6 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 342..507
e-value: 9.5E-52
score: 178.2
coord: 209..332
e-value: 7.3E-34
score: 119.5
coord: 765..928
e-value: 2.9E-35
score: 124.1 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 528..647
e-value: 3.7E-36
score: 127.2 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 271..550 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13041 | PPR_2 | coord: 477..524
e-value: 4.9E-10
score: 39.4
coord: 406..452
e-value: 3.7E-12
score: 46.2
coord: 269..313
e-value: 9.3E-8
score: 32.1
coord: 792..839
e-value: 2.2E-7
score: 30.9
coord: 162..208
e-value: 3.2E-7
score: 30.4 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13812 | PPR_3 | coord: 641..699
e-value: 1.3E-5
score: 25.2
coord: 605..632
e-value: 0.0084
score: 16.2
coord: 536..596
e-value: 3.4E-13
score: 49.5
coord: 711..770
e-value: 6.4E-7
score: 29.4 |
| IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 585..618
e-value: 5.1E-6
score: 24.3
coord: 831..862
e-value: 1.1E-4
score: 20.1
coord: 621..653
e-value: 5.7E-5
score: 21.0
coord: 375..407
e-value: 4.6E-4
score: 18.2
coord: 691..723
e-value: 1.2E-4
score: 20.0
coord: 235..264
e-value: 5.7E-5
score: 21.0
coord: 515..549
e-value: 1.2E-5
score: 23.2
coord: 270..301
e-value: 5.5E-8
score: 30.5
coord: 130..162
e-value: 1.6E-5
score: 22.7
coord: 199..233
e-value: 2.4E-6
score: 25.4
coord: 164..198
e-value: 1.8E-4
score: 19.4
coord: 550..584
e-value: 6.4E-6
score: 24.0
coord: 795..828
e-value: 0.0011
score: 17.0
coord: 656..688
e-value: 0.002
score: 16.2
coord: 105..126
e-value: 0.0032
score: 15.5
coord: 727..758
e-value: 1.4E-4
score: 19.8
coord: 480..514
e-value: 2.7E-7
score: 28.3
coord: 766..794
e-value: 6.5E-4
score: 17.7
coord: 409..442
e-value: 7.2E-9
score: 33.3
coord: 339..372
e-value: 1.9E-7
score: 28.8
coord: 306..338
e-value: 2.7E-6
score: 25.2 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF01535 | PPR | coord: 375..400
e-value: 0.0031
score: 17.7
coord: 340..369
e-value: 3.5E-7
score: 30.0
coord: 130..159
e-value: 3.0E-4
score: 20.8
coord: 105..125
e-value: 0.018
score: 15.2
coord: 235..264
e-value: 1.7E-4
score: 21.6 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 828..862
score: 11.268 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 442..472
score: 9.372 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 723..757
score: 10.523 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 93..123
score: 5.908 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 548..582
score: 11.641 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 407..441
score: 13.504 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 793..827
score: 10.6 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 337..371
score: 11.477 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 127..161
score: 8.758 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 302..336
score: 10.523 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 513..547
score: 11.181 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 232..266
score: 11.181 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 863..897
score: 7.048 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 478..512
score: 12.09 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 197..231
score: 11.707 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 758..792
score: 9.58 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 267..301
score: 12.244 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 688..722
score: 10.391 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 583..617
score: 12.079 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 653..687
score: 9.931 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 372..406
score: 10.928 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 618..652
score: 10.907 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 162..196
score: 10.643 |
| None | No IPR available | PANTHER | PTHR46128 | FAMILY NOT NAMED | coord: 776..896
coord: 509..668
coord: 638..785
coord: 292..442
coord: 242..400
coord: 106..263
coord: 395..525 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 18..22 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..5 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 23..931 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..22 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 6..17 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..22
score: 0.565 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_L-elsbetiae_contig989.18829.1 ID=prot_L-elsbetiae_contig989.18829.1|Name=mRNA_L-elsbetiae_contig989.18829.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=932bp
MLPEYATTVVLVLSCAVGSGNAFTGPISSSPRPRSGPKESWHARVPPRPT
RGAARGVRQQQTPPTHLHCSTRSADRDASQTRAVTNVGRHAISKPKLQAA
LREAGKSGSWRKALGILDEMKERGIVSGPSYTTAITVCGRQGEWEKALVL
LGEMPTYGVPWNAFSCNAAVEALGSGGQWEEAVGLLREFPDRGVPPDAFT
YNSAIKACRMGRNPKEAIKLLREMPGRGITPDVFSYKGAIGACGDAGELE
EGLRLFREMQEKGLTAGAASYNIAIRAYAERGRWEGAIELLKEMSTRGVT
PGPFDYNAVLRALGNGGQGEGAVELLKEMWQAGVPPNCFCYSSAITACGR
AGQWEKAVELLKEMPSRGVPQDVRCYNSAIIACGKGGQRKEAEDLLEEML
PLGIMPDAVSYNSIIEACAKGGEWKRALQWLREMPKRGLSPDRVSYNIAI
RANGDKGRWMEAQELLREMEEEHGLTPNIVSYNSALMALGRGGQWQRAVD
LLKDMRDRGINPDAISFNSAIAACGNGDEWKRAVELLREMLELGVAPDVI
SYTSAIEACAKSSEWQRALELLREMPERQVVPNIVTYNSAIKACGNGGEW
EKSIELLREVTERGIDPTLLSYNSAIKAVGKRGRLKEALGLLQEMPGFGL
TPNLACFNSAIEACKAEGQWELAVGLLKFMDEQGVSPTLNSYSLAIESCM
KDGRGGEAVALLKEMAEKGITPSIINFSSAIGACGNGGMWKDALELLRVM
REHGLAPSIFNLNEAIQACGRGGQWEKAVGLLKELPSYGLTPDAISYNSA
IEACEVEGQWEVAITLLNFMTERGVNPSVTSYTLALEACRKAGRGEEAAK
LLRDMVERGLAPLAINFRSAVDACPNSGQWDAVLEVLRETPVQGLGPGAA
VGFNAALEACEKGGAWEDMRQQVLDALAPLD* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011990 | TPR-like_helical_dom_sf |
| IPR002885 | Pentatricopeptide_repeat |
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