prot_L-elsbetiae_contig9874.18813.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9874.18813.1
Unique Nameprot_L-elsbetiae_contig9874.18813.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length346
Homology
BLAST of mRNA_L-elsbetiae_contig9874.18813.1 vs. uniprot
Match: A0A6H5KH15_9PHAE (Arrestin_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH15_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 7.860e-130
Identity = 208/345 (60.29%), Postives = 249/345 (72.17%), Query Frame = 0
Query:    1 MYKATGIVPTTSGAATYTHRDNSNEYIEFLGFDVQLASFGGKVAPGVQSFPFSVVLPSELPPSMKETGGGGSMAIAYGFSARLHRPGLLNFDSKGKAQLKVLSRPQETDATQPVLVGPDARPVKQCYCMQSGSMSIGFQADRSAVGRNEAVGVTVVARNDSSVAVKNLLIELVQETKYWARGSQDCSTRTLTSVEVPITELAQVEVGDNRGRSQSSSAIAGAARADLEQQLAVGAGAKREILVPGDTTITFRSETIEVRHLLTVRLETPSCVDSPDAWMPLRIQPGTQPGTSSTVPEV--KPSHFAPSSAEAATLVNVDPVVVPQNALRLEYSYELPENSGPARK 343
            M+ ATG+VPTTSGAA YT+RD  +E +EFLG+DVQLA FGGK A G  ++ FSV LP  LP SMKE GG GS AIAYGF ARLHRPGLLNFD+KGK QLKVL +P+ET A+ PV+ GP  + VK+CYC+QSGSMS+GFQADRS VG NE+VGV VVARNDSSVAVKNL +ELVQET + A G+ D STR + SV VP  EL   E G  RG  QS++AIA  ARADLE+QLA GAG + E+ VP DT+IT  SETI+VRH+LTVR++ P CV+ PD W  L +QPGT    S  VP+V  + S  APSS      V V P     +A++L Y++E P  SG   K
Sbjct:   53 MFIATGVVPTTSGAAPYTYRDMLSEDVEFLGYDVQLADFGGKAASGEHTYDFSVTLPPSLPASMKEQGGNGSCAIAYGFRARLHRPGLLNFDAKGKVQLKVLGKPEETSASSPVVAGPAVKAVKKCYCLQSGSMSLGFQADRSVVGLNESVGVIVVARNDSSVAVKNLRVELVQETSWTANGAGDVSTRVVKSVVVPGAELGAAEFGGQRG--QSAAAIADTARADLERQLASGAGTRHELTVPADTSITLNSETIQVRHVLTVRIQGPRCVECPDVWTSLHVQPGT----SGVVPKVHEETSSLAPSSTARPVTVTVPP-----SAVKLAYNHEQPRTSGTVGK 386          
BLAST of mRNA_L-elsbetiae_contig9874.18813.1 vs. uniprot
Match: D7FWP6_ECTSI (Arrestin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP6_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 5.300e-108
Identity = 196/374 (52.41%), Postives = 230/374 (61.50%), Query Frame = 0
Query:    1 MYKATGIVPTTSGAATYTHRDNSNEYIEFLGFDVQLASFGGKVAPGVQSFPFSVVLPSELPPSMKETGGGGSMAIAYGFSARLHRPGLLNFDSKGKAQLKVLSRPQETDATQPVLVGPDARPVKQCYCMQSGS-----------------------------MSIGFQADRSAVGRNEAVGVTVVARNDSSVAVKNLLIELVQETKYWARGSQDCSTRTLTSVEVPITELAQVEVGDNRGRSQSSSAIAGAARADLEQQLAVGAGAKREILVPGDTTITFRSETIEVRHLLTVRLETPSCVDSPDAWMPLRIQPGTQPGTSSTVPEV--KPSHFAPSSAEAATLVNVDPVVVPQNALRLEYSYELPENSGPARK 343
            M+ ATG+VPT SGAA YT+RD  +E +EFLG+DVQLA FGG+ A G  ++ FSV LP  LP SMKE GGGGS AIAYGF ARLHRPGLLNFD+KGK QLKVL +PQET A+ PV+ GP+   VK+CYC+QSGS                             MS+GFQADRS VG NE+VG+TVVARNDSSVAVKNL IELVQET + A G+ D STR + SV VP  EL  VE G  RGRS  ++AIA  ARADLE QLA GAG + E+ VP DT+IT  SETI                               QPGTS  VP+V  + S  APSS      V V P     +A++L Y++E P  SG   K
Sbjct:   53 MFTATGVVPTESGAAPYTYRDTLSEDVEFLGYDVQLADFGGRAASGEHTYDFSVTLPPSLPASMKEQGGGGSCAIAYGFRARLHRPGLLNFDAKGKVQLKVLGKPQETSASSPVVAGPEVMAVKKCYCLQSGSCVAESRSTMDLGHRHARWQHGAPTNSHESMSLGFQADRSVVGLNESVGITVVARNDSSVAVKNLRIELVQETSWTANGAGDVSTRAVKSVVVPGAELGAVEFGGQRGRS--AAAIADTARADLESQLASGAGTRYELTVPADTSITLNSETI-------------------------------QPGTSGVVPKVHEETSSLAPSSTARPVTVTVPP-----SAVKLAYNHEQPRTSGAVGK 388          
BLAST of mRNA_L-elsbetiae_contig9874.18813.1 vs. uniprot
Match: D7FWP5_ECTSI (Arrestin_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP5_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 1.130e-102
Identity = 175/342 (51.17%), Postives = 224/342 (65.50%), Query Frame = 0
Query:    1 MYKATGIVPTTSGAATYTHRDNSNEYIEFLGFDVQLASFGGKVAPGVQSFPFSVVLPSELPPSMKETGG-GGSMAIAYGFSARLHRPGLLNFDSKGKAQLKVLSRPQETDATQPVLVGPDARPVKQCYCMQSGSMSIGFQADRSAVGRNEAVGVTVVARNDSSVAVKNLLIELVQETKYWARGSQDCSTRTLTSVEVPITELAQVEVGDNRGRSQSSSAIAGAARADLEQQLAVGAGAKREILVPGDTTITFRSETIEVRHLLTVRLETPSCVDSPDAWMPLRIQPGTQPGTSSTVPEVKPSHFAPSSAEAATLV-------NVDPVVVPQNALRLEYSYEL 334
            MY  T +    S A +YTHR+   E  EFL +DVQLA+FGGK A G  SFPF V+LP  LPPSM+E G  GGS  I YGF ARLHRPG+L+FD+KGKA+L VLS+P E  A  PVLVGP  + VK+  C +SGSMSIGFQAD S VG NE VG+TVVARNDSS  VK + +E+ Q + ++ARG ++  TRT+ +V VP T+L   E G+ RGRS  S+ IA  ARADL++QL  GAG   ++LVPG++ +T +++ IEV+H L+V L+TP C+ SPD W PL +  GT         E     F P S EA           NV PV VPQ+A+ +EY+  +
Sbjct:   54 MYDTTNMAHNNSNAQSYTHREMLTEKKEFLSYDVQLAAFGGKAASGSHSFPFQVMLPPGLPPSMEENGSQGGSCEIFYGFEARLHRPGMLHFDAKGKAKLTVLSKPHEAGAATPVLVGPATQTVKKFCCFKSGSMSIGFQADHSEVGLNETVGLTVVARNDSSAEVKTMHVEIKQVSTWFARGYKESKTRTVAAVVVPGTQLRASEKGNQRGRS--SAVIADTARADLQEQLGAGAGTHYDLLVPGNSLLTLQADLIEVKHTLSVMLKTPHCISSPDVWTPLLVHAGTTSAPDGVSGE---GLFVPHSGEAIPFATGLDDEGNVKPVSVPQSAVTMEYTNNI 390          
BLAST of mRNA_L-elsbetiae_contig9874.18813.1 vs. uniprot
Match: A0A7S4VBL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VBL5_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 7.160e-12
Identity = 49/173 (28.32%), Postives = 80/173 (46.24%), Query Frame = 0
Query:   30 LGFDVQLASFG-GKVAPGVQSFPFSVVLPSELPPSMKETGGGGSMAIAYGFSARLHRPG----LLNFDSKG-----KAQLKVLSRPQETDATQP-VLVGPDARPVKQCYCMQSGSMSIGFQADRSAVGRNEAVGVTVVARNDSSVAVKNLLIELVQETKYWARGSQDCSTRTL 191
            L  D  LA+FG G + PG   FPF   LPS +PP+M+ET G     + Y   A L +PG    L N  +K        +L ++ +PQ        + + P+A+ +  C C   G+M++  + +R+ +   +   V    RNDS+     +   L +   + A G Q   +R +
Sbjct:   49 LKLDTPLANFGHGSIKPGQYEFPFISTLPSNIPPTMRETAGKSHCEVRYSIGAHLVQPGGAGGLFNRITKSWLRTLPKELIIIGKPQLAGIIAGGIALPPEAQSINYCCCFNRGTMTLDAELERTILSPGDTTNVFFRCRNDSTTPAFGVQAHLRETITWRASGHQQTKSRLI 221          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9874.18813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KH15_9PHAE7.860e-13060.29Arrestin_C domain-containing protein n=1 Tax=Ectoc... [more]
D7FWP6_ECTSI5.300e-10852.41Arrestin_N domain-containing protein n=1 Tax=Ectoc... [more]
D7FWP5_ECTSI1.130e-10251.17Arrestin_N domain-containing protein n=2 Tax=Ectoc... [more]
A0A7S4VBL5_9STRA7.160e-1228.32Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011022Arrestin C-terminal-like domainSMARTSM01017Arrestin_C_2coord: 130..286
e-value: 4.5E-4
score: 29.5
IPR011022Arrestin C-terminal-like domainPFAMPF02752Arrestin_Ccoord: 131..282
e-value: 4.5E-8
score: 33.6
IPR014752Arrestin, C-terminalGENE3D2.60.40.640coord: 3..109
e-value: 2.9E-9
score: 38.8
IPR014752Arrestin, C-terminalGENE3D2.60.40.640coord: 119..215
e-value: 4.2E-7
score: 31.8
NoneNo IPR availablePANTHERPTHR11188ARRESTIN DOMAIN CONTAINING PROTEINcoord: 31..327
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 123..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9874contigL-elsbetiae_contig9874:700..2623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9874.18813.1mRNA_L-elsbetiae_contig9874.18813.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9874 619..3287 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9874.18813.1 ID=prot_L-elsbetiae_contig9874.18813.1|Name=mRNA_L-elsbetiae_contig9874.18813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=346bp
MYKATGIVPTTSGAATYTHRDNSNEYIEFLGFDVQLASFGGKVAPGVQSF
PFSVVLPSELPPSMKETGGGGSMAIAYGFSARLHRPGLLNFDSKGKAQLK
VLSRPQETDATQPVLVGPDARPVKQCYCMQSGSMSIGFQADRSAVGRNEA
VGVTVVARNDSSVAVKNLLIELVQETKYWARGSQDCSTRTLTSVEVPITE
LAQVEVGDNRGRSQSSSAIAGAARADLEQQLAVGAGAKREILVPGDTTIT
FRSETIEVRHLLTVRLETPSCVDSPDAWMPLRIQPGTQPGTSSTVPEVKP
SHFAPSSAEAATLVNVDPVVVPQNALRLEYSYELPENSGPARKQW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011022Arrestin_C-like
IPR014752Arrestin_C
IPR014756Ig_E-set