prot_L-elsbetiae_contig9871.18812.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9871.18812.1
Unique Nameprot_L-elsbetiae_contig9871.18812.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length315
Homology
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Match: A0A6H5JAK5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAK5_9PHAE)

HSP 1 Score: 380 bits (976), Expect = 1.090e-129
Identity = 216/293 (73.72%), Postives = 239/293 (81.57%), Query Frame = 0
Query:   41 MLAFIVIFIVFGSLSIVLLLPQTVLFLAAGYACSNRIYSRLLTFAVALNLSLVTFVVGASIAFLLSRSVLPPSCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAPYNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSVDDIDSLFTYTSPGWYCVYAALAVACVVSFVAIVRYTSAEMKAAVRAAPR-LGDDXXXXXXXXXVDGEDDFGELPPESTTFGTFTS---C-GGEXXXXXXXXXXXXXX------------VIAREPLLGAE-RQKNGPVGAR 315
            MLAFIVIFIVFG+LSIV+LLPQTVLFLAAGYAC++R+ ++ L FAVALNLSLVTF++GASIAFLL+RSVLPPSCTRKFFKH+AIL+GLDHAL+HKGRRII LLRINPM+PYNALNYGLGLSSCTF+AYLQGM GA PFTCIAVYAGM+ISSVDDIDSLFTYTS GWYCVYAAL VACVVSFVAIVRYTSAEMKAAVR+APR  G D         VDGE++FGELPP+ST FGTFTS   C GGE       XXXX               V+AR PLLG + R+KNG    R
Sbjct:    1 MLAFIVIFIVFGALSIVMLLPQTVLFLAAGYACADRLRNQYLAFAVALNLSLVTFIIGASIAFLLARSVLPPSCTRKFFKHFAILEGLDHALQHKGRRIIFLLRINPMSPYNALNYGLGLSSCTFRAYLQGMVGAFPFTCIAVYAGMLISSVDDIDSLFTYTSTGWYCVYAALGVACVVSFVAIVRYTSAEMKAAVRSAPRPAGGDR--------VDGEEEFGELPPDSTMFGTFTSRSECYGGEEGRGGNAXXXXDEKEEGEAMETFDEIVVARAPLLGGDPRRKNGVAAER 285          
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Match: A0A7S4W131_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W131_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.980e-16
Identity = 58/181 (32.04%), Postives = 96/181 (53.04%), Query Frame = 0
Query:   17 VDLFTTCYSLQATEDFLTWLDGENMLAFIVIFIVFGSLSIVLLLPQTVLFLAAGYACSNRIYSRLLTFAVALNLSLVTFVVGASIAFLLSRSVLPPSCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAPYNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSVDDIDS 197
            +DL TT  +++   DFL W++ +N  A +  FI    ++ +  +P  +L L AG+  +N +   +  F   + +    F  GA  +FL+ R +L   C  K  K   I + +D AL+ KG RI+ILLR++P+ P+N  NY  G++S + + Y  GM G +P T + +  G    S+ D  S
Sbjct:   45 IDLATTKNTMRIVADFLDWIE-DNPAAGVFAFIGVYIIASIFFIPGLILTLGAGFVFANALGLGVGIFLATVAVFFGAFF-GACASFLIGRYLLR-DCVGKLTKKRVIFEAIDAALKDKGLRIMILLRVSPLVPFNVFNYVAGVTSISLRDYAIGMIGILPGTLLYILLGSSAGSLVDSSS 222          
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Match: A0A7S2MII1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MII1_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 7.680e-16
Identity = 64/188 (34.04%), Postives = 100/188 (53.19%), Query Frame = 0
Query:   17 VDLFTTCYSLQATEDFLTWLDG---ENMLAFIVIFIVFGSLSIVLLLPQTVLFLAAGYACSNRIYSRLLTFAVALNLSLVTFVVGASI----AFLLSRSVLPPSCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAPYNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSVDDIDS 197
            VD  T+ +   A E FL W++    E + AF+ ++ V    + +L  P  +L L AG+  +N      L   + + L+     VGAS     AFL+ R +L         K YAI + +D AL+ KG RI+ILLR++P+ P+NALNY +G++S +F+ +   M G +P T + V+ G    S+ D  S
Sbjct:   48 VDFATSKHLRTAMESFLNWIEDNPTEGVFAFMGVYFV----ATILFAPGLILTLGAGFVFANA-----LGLGLGVVLATTAVFVGASTGSMAAFLIGRYLLRDWVVG-LTKKYAIFEAVDVALKEKGLRIMILLRLSPLIPFNALNYIVGVTSVSFRDFTIAMIGILPGTLLYVFLGSSAGSLTDSSS 225          
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Match: B7GDD3_PHATC (Predicted protein n=3 Tax=Sar TaxID=2698737 RepID=B7GDD3_PHATC)

HSP 1 Score: 85.9 bits (211), Expect = 1.440e-15
Identity = 54/183 (29.51%), Postives = 98/183 (53.55%), Query Frame = 0
Query:   18 DLFTTCYSLQATEDFLTWLDGENMLAFIVIFIVFGSLSIVLLLPQTVLFLAAGYACSNRIYSRLLTFAVALNLSLVTFVV------GASIAFLLSRSVLPPSCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAPYNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSVDD 194
            D  T  Y     + FL W++ EN +  I +F++    + +L +P ++L L AG+  ++       +F + L L +  F V      GA+ +F + R +L    T K  K YA+ + LD AL+  G +I++LLR++P+ P+NA+NY  G+++ + + Y+  +   +P T + V+ G    S+ D
Sbjct:   40 DSLTNRYVRDGIDSFLDWIE-ENSVEGIFLFVLVYFAATILFIPGSILTLGAGFVFAS-------SFGLGLGLVIGVFAVFLGASLGATASFFIGRYLLRDQAT-KLTKKYAVFEALDVALQENGLKILVLLRLSPIVPFNAINYICGVTAVSIRDYILALFAILPGTTLYVFLGASAGSLSD 213          
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Match: A0A7S4JVV3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVV3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.690e-15
Identity = 63/184 (34.24%), Postives = 97/184 (52.72%), Query Frame = 0
Query:   17 VDLFTTCYSLQATEDFLTWLDGENMLAFIVIFIVFGSLSIVLLLPQTVLFLAAGYACSNRIYSRLLTFAVALNLSLVTFVVGASIAFLLSRSVLPP---SCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAPYNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSVDDIDS 197
            +D  T  Y     + FL W++ EN +    +F+    L+ VL +P  +L L AGY  SN   + L  F   +++  V   +G+ +AFL+SR +L       T KF     I   +D AL  KG +IIILLR++P+ P+NALNY  G+++ +FK Y   +   +P T + V+ G    S+  I S
Sbjct:   34 IDSTTNGYIKDGIQTFLRWIE-ENPIEGFFMFMGVYVLATVLFVPGLILTLGAGYVFSNAFGTGLGLFVGTISV-FVGASLGSMLAFLISRYILREWAVGLTEKF----PIFRAIDQALEEKGLKIIILLRLSPVIPFNALNYVCGVTAVSFKDYSLALFAMLPGTILYVFLGASAQSLATIGS 211          
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Match: A0A448ZNF0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNF0_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.450e-15
Identity = 48/164 (29.27%), Postives = 92/164 (56.10%), Query Frame = 0
Query:   32 FLTWLDGENMLAFIVIFIVFGSLSIVLLLPQTVLFLAAGYACSNRIYSRLLTFAVALNLSLVTFVVGASIAFLLSRSVLPPSCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAPYNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSVDDI 195
            FL W++ ++++  ++ F++   L+ V  +P ++L L AG+  S+ + S  +   +      V   +GA +AFLL R +   +   K  + Y I + +D AL   G +I++LLR++P+ P+NALNY +G+++  F  Y+    G +P T + V+ G    S+ ++
Sbjct:  123 FLEWIE-DHLVVGVLSFVLVYFLATVFFIPGSILTLGAGFVFSSAMDSLWIGVLLGTAAVFVGASLGAIVAFLLGRYLFREAVAVKLTQKYKIFEAIDRALEQNGLKIMVLLRLSPIFPFNALNYSMGITAIRFWDYVLACLGMLPGTIVYVFLGASAGSLAEL 285          
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Match: A0A843T7A3_9BACT (TVP38/TMEM64 family membrane protein n=1 Tax=Gemmatimonas sp. TaxID=1962908 RepID=A0A843T7A3_9BACT)

HSP 1 Score: 81.3 bits (199), Expect = 3.530e-14
Identity = 55/163 (33.74%), Postives = 89/163 (54.60%), Query Frame = 0
Query:   32 FLTWLDGENMLAFIVIFIVFGSLSIVLLLPQTVLFLAAGYACSNRIYSRLLTFAVALNLSLVTF--VVGASIAFLLSRSVLPPSCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAPYNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSV 192
            F+ W++ +   A I +F++  + + V  +P ++L LAAG             F VA  ++LV    V+G+S+AFLL+R    P    +     +  D +D A+  +GR+I+ LLR++P+ PYN LNY LGL+   F  YL    G +P T + VY+G +I  +
Sbjct:   61 FVDWVESQGTWAPI-LFVLGYAAATVAFVPGSLLTLAAGAV-----------FGVARGVTLVFLGAVLGSSLAFLLARHAARPLVESRIAND-SRFDRIDRAVARRGRKIVFLLRLSPLLPYNLLNYALGLTRVRFPDYLLASIGMLPGTLLYVYSGRVIGDL 210          
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Match: A0A1E7F599_9STRA (SNARE_assoc-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F599_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.780e-14
Identity = 52/174 (29.89%), Postives = 93/174 (53.45%), Query Frame = 0
Query:   31 DFLTWLDGE---NMLAFIVIFIVFGSLSIVLLLPQTVLFLAAGY---ACSNRIYSRLLTFAVALNLSLVTFV---VGASIAFLLSRSVLPPSCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAPYNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSVDDI 195
            +FL W++      +LAF+++++V      +  +P ++L L AG+   A ++ +++ +L   +A      TF+   +GA ++FLL R +   S + K    Y +   +D AL  KG RI+ILLR++P+ P+N LNY  G++      Y     G +P T + V+ G    S+ +I
Sbjct:    7 EFLNWVEQNPIYGVLAFVLVYVV----CTIFFIPGSILTLGAGFVFTASTSSLWTGVLLGTIA------TFIGASIGAILSFLLGRYLFRESISTKLITKYPVFTAIDTALNEKGLRIMILLRLSPIIPFNVLNYVSGITGIKLFDYCIACIGMLPGTILYVFLGSSAGSLSEI 170          
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Match: A0A7S4TAP9_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TAP9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.770e-14
Identity = 51/183 (27.87%), Postives = 99/183 (54.10%), Query Frame = 0
Query:   16 TVDLFTTCYSLQATEDFLTWLDGENMLAFIVIFIVFGSLSIVLLLPQTVLFLAAGYACSNRIYSRLLTFAVALNLSLVTFVVGASIAFLLSRSVLPPSCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAPYNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSVDDIDSL 198
            TVD+    Y      +FL W+  ++   F+V FI+F +++ ++ +P  +L  AAGY     +Y  +L FAVA+    +   +GA ++FL +R  +     + F + Y+I+     AL+  G ++++LLR++P+ P+NA NY  G++   ++ +   + G +P   + + AG    S+   D++
Sbjct:   89 TVDMLFFGYISPKLVEFLKWI-AQHPTWFLVTFIMFYAIATLMFIPPFLLTFAAGYIY-RMLYRPVLGFAVAMGACFIGSYIGAVLSFLRAR-YMSRDLVKLFARRYSIIRATTRALKRNGLKVMLLLRLSPIIPFNATNYIGGVTGVRWEIFSLAILGIIPMQALTIAAGASARSISYHDAM 268          
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Match: A0A7S2E6M1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6M1_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.460e-13
Identity = 61/194 (31.44%), Postives = 106/194 (54.64%), Query Frame = 0
Query:    8 LLLVLTVTTVDLFTTCYSLQA-TEDFLTWLDGENMLAFIVIFIVFGSLSIVLLLPQTVLFLAAGYACSNRIYSRLLTFAVALNLSLVTFVVGASI----AFLLSRSVLPPSCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAPYNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSVDDID 196
            +LLVL +  +DL T+   +Q   +D L+W++     A +++FI+  +L  VL +P  +L +  G+     ++   LT AV +  +  T  +GAS+    AFLL R +    C     K Y + + +D AL H G +I+ILLR++P+ PYNAL++  G++S +  +Y   + G +P   +  + G   S++ D D
Sbjct:   99 ILLVLVI--IDLSTSSQHIQHWLKDLLSWMEFHPY-AGVLVFILVYALCTVLFIPGAILTIGCGFTF-GYVHDTSLTKAVII--ASTTVFLGASLGSIMAFLLGRYLFR-DCVLNMAKEYPMFEAVDRALEHNGIKIMILLRLSPLIPYNALDFMSGITSISIASYSIALLGVLPGVVLYTFIGATASTLGDHD 285          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9871.18812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAK5_9PHAE1.090e-12973.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4W131_9STRA1.980e-1632.04Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2MII1_9STRA7.680e-1634.04Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B7GDD3_PHATC1.440e-1529.51Predicted protein n=3 Tax=Sar TaxID=2698737 RepID=... [more]
A0A7S4JVV3_9STRA2.690e-1534.24Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A448ZNF0_9STRA6.450e-1529.27Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A843T7A3_9BACT3.530e-1433.74TVP38/TMEM64 family membrane protein n=1 Tax=Gemma... [more]
A0A1E7F599_9STRA4.780e-1429.89SNARE_assoc-domain-containing protein (Fragment) n... [more]
A0A7S4TAP9_9STRA6.770e-1427.87Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S2E6M1_9STRA1.460e-1331.44Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 60..186
e-value: 5.2E-14
score: 52.8
IPR015414Transmembrane protein TMEM64PANTHERPTHR12677UNCHARACTERIZEDcoord: 6..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..160
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 226..315
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..69
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 161..171
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..19
score: 0.538
NoneNo IPR availableTMHMMTMhelixcoord: 44..68
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
NoneNo IPR availableTMHMMTMhelixcoord: 205..227
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 168..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9871contigL-elsbetiae_contig9871:877..5063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9871.18812.1mRNA_L-elsbetiae_contig9871.18812.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9871 877..5063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9871.18812.1 ID=prot_L-elsbetiae_contig9871.18812.1|Name=mRNA_L-elsbetiae_contig9871.18812.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=315bp
QVIFCSVLLLVLTVTTVDLFTTCYSLQATEDFLTWLDGENMLAFIVIFIV
FGSLSIVLLLPQTVLFLAAGYACSNRIYSRLLTFAVALNLSLVTFVVGAS
IAFLLSRSVLPPSCTRKFFKHYAILDGLDHALRHKGRRIIILLRINPMAP
YNALNYGLGLSSCTFKAYLQGMAGAVPFTCIAVYAGMIISSVDDIDSLFT
YTSPGWYCVYAALAVACVVSFVAIVRYTSAEMKAAVRAAPRLGDDDGGGG
ANGGVDGEDDFGELPPESTTFGTFTSCGGESGGEGGGGDEDDEVVIAREP
LLGAERQKNGPVGAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032816SNARE_assoc
IPR015414TMEM64