prot_L-elsbetiae_contig9864.18805.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9864.18805.1
Unique Nameprot_L-elsbetiae_contig9864.18805.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length442
Homology
BLAST of mRNA_L-elsbetiae_contig9864.18805.1 vs. uniprot
Match: D7FZ11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ11_ECTSI)

HSP 1 Score: 424 bits (1090), Expect = 5.310e-136
Identity = 248/366 (67.76%), Postives = 280/366 (76.50%), Query Frame = 0
Query:   78 AGELLMPLMKSIYSNADKLNRRQAAAVVAHLVRPGKAGGGFAKCLVSKLREHSPVKCLEVHMATLRVFYDKWVMSIAAAGDDAGDGDGDANLTDDEKMHKQWEQDQAGMDRWLPLARRLSMSLGVGPLRSRDPAEQKTLQDLFLGFMKVGVRFALDPEGDRLLFLEGMREYASKVTPRQKKVLGKAFDDEAKSLHDNVLEEGRDFAPVWDSGDTQASAERKGNGREKLCQQDVAPRWRAFFSFRNSLSPGSAASFIPDTNSNSAGSGYGSGADALSLSPPNSINGSSVGTRTPASVGRLVRMGGSAMATSSISGGSGGSAKRRGRVTGRTASARNLGRMSMASAASDLLPVAEE-GLFQVRALSGN 442
            AG LLMPLMKSIYSNADKLNRRQAAAVVAHLVR GK G GFAKC VSKL++HSPVKCLEVHMATLRVFYDKWV++ AA G+   D   DA+L+DDEK  KQW+QD AGM+RWLPLARRLSMSLGVGPL+S+D AEQKTLQDLFLGFMKVGVRFALD EGDRLLFLEGMREY+SKVT RQKK L KAFDDEAK LHD VLEEGR+ A  WDSG+ Q               +DVAPRWRAFFSFR++L+ GSAASFIP+      G GY S  DA S+SP +S +GSS+GT  PAS G   R  GS ++++S +GG GGS KRRGRV GR + A    R S+AS   DL+PVAEE G+ Q   L  N
Sbjct:  536 AGLLLMPLMKSIYSNADKLNRRQAAAVVAHLVRSGKTGSGFAKCFVSKLKDHSPVKCLEVHMATLRVFYDKWVVAAAADGNVEED---DADLSDDEKTRKQWDQDLAGMERWLPLARRLSMSLGVGPLKSKDLAEQKTLQDLFLGFMKVGVRFALDAEGDRLLFLEGMREYSSKVTARQKKALAKAFDDEAKGLHDQVLEEGRENATSWDSGEGQ---------------EDVAPRWRAFFSFRSTLTAGSAASFIPE------GRGYASSGDASSVSPSHSASGSSMGT--PASRGTKRRAVGSGVSSTSSAGG-GGSVKRRGRVGGRVSMASVRSRRSVAS---DLMPVAEEDGMQQDEQLEDN 871          
BLAST of mRNA_L-elsbetiae_contig9864.18805.1 vs. uniprot
Match: A0A6H5J7R4_9PHAE (SCD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R4_9PHAE)

HSP 1 Score: 412 bits (1059), Expect = 9.320e-128
Identity = 245/368 (66.58%), Postives = 275/368 (74.73%), Query Frame = 0
Query:   78 AGELLMPLMKSIYSNADKLNRRQAAAVVAHLVRPGKAGGGFAKCLVSKLREHSPVKCLEVHMATLRVFYDKWVMSIAAAGDDAGDGDGDANLTDDEKMHKQWEQDQAGMDRWLPLARRLSMSLGVGPLRSRDPAEQKTLQDLFLGFMKVGVRFALDPEGDRLLFLEGMREYASKVTPRQKKVLGKAFDDEAKSLHDNVLEEGRDFAPVWDSGDTQASAERKGNGREKLCQQDVAPRWRAFFSFRNSLSPGSAASFIPDTNSNSAGSGYGSGADALSLSPPNSINGSSVGTRTPASVGRLVRMGGSAMATSSISGGSGGSAKRRGRVTGRTA--SARNLGRMSMASAASDLLPVAEE-GLFQVRALSGN 442
            AG LLMPLMKSIYSNADKLNRRQAAAVVAHLVR GK G GFAKC VSKL++HS VKCLEVHMATLRVFYDKWV++ AA G    D   DA+L+DDE   KQW+QD AGM+RWLPLARRLSMSLGVGPL+S+D AEQKTLQDLFLGFMKVGVRFALD EGDRLLFLEGMREY+SKVT RQKK L   FDDEAK LHD+VLEEGR+ A  WDSG+ Q               +DVAPRWRAFFSFR++L+ GSAASFIP+      G GY S  DA S+SP  S +GSS+GT  PAS G   + GGS ++++S SG  GG  KRRGRV GR +  SAR     S  S ASDL+PVAEE G+ Q   L  N
Sbjct: 1014 AGLLLMPLMKSIYSNADKLNRRQAAAVVAHLVRSGKTGSGFAKCFVSKLKDHSLVKCLEVHMATLRVFYDKWVVAAAADGSVEED---DADLSDDENTRKQWDQDLAGMERWLPLARRLSMSLGVGPLKSKDLAEQKTLQDLFLGFMKVGVRFALDAEGDRLLFLEGMREYSSKVTARQKKALANVFDDEAKGLHDHVLEEGRENATSWDSGEGQ---------------EDVAPRWRAFFSFRSTLTAGSAASFIPE------GRGYASSGDASSVSPSQSASGSSMGT--PASRGTERKAGGSGVSSTS-SGSGGGIVKRRGRVGGRVSMTSAR-----SRRSVASDLMPVAEEDGMQQDEQLEDN 1349          
BLAST of mRNA_L-elsbetiae_contig9864.18805.1 vs. uniprot
Match: A0A7R9Y845_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y845_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.890e-12
Identity = 60/178 (33.71%), Postives = 88/178 (49.44%), Query Frame = 0
Query:   81 LLMPLMKSIYSNADKLNRRQAAAVVAHLVRPGKAGGGFAKCLVSKLREHSPVKCLEVHMATLRVFYDKWVMSIAAAGDDAGDGDGDANLTDDEKMHKQWEQDQAGMDRWLPLARRLSMSLG-VGPLRSRDPAEQKTLQDLFLGFMKVGVRFALDPEGDRLLFLEGMREYASKVTPRQK 257
            +L PLMK+   +A+ LNRRQAAA V H V  G       K   + LR+    K LEV MATLR++Y +WV         +  G+ D  L D   +             ++PLA RLS S+G VG +R+      +++Q   L F+K GV FA +   D+  F  G+  +  + + + K
Sbjct:   79 ILEPLMKASICHAEHLNRRQAAAAVGHFVHSGPDRAETVKEFSTILRKLDASKYLEVVMATLRLWYGRWV---------SNRGEEDEELPDPLVL-------------FVPLAERLSKSIGGVGLVRT------ESMQQPLLKFLKAGVAFAAEGVPDKCGFFAGLVPFVKRASKQIK 228          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9864.18805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZ11_ECTSI5.310e-13667.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7R4_9PHAE9.320e-12866.58SCD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7R9Y845_9STRA4.890e-1233.71Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..442
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9864contigL-elsbetiae_contig9864:657..7214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9864.18805.1mRNA_L-elsbetiae_contig9864.18805.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9864 639..7214 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9864.18805.1 ID=prot_L-elsbetiae_contig9864.18805.1|Name=mRNA_L-elsbetiae_contig9864.18805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=442bp
MEGAMLAAAAQAHGRPKRSSKNVLKNGLKVERGEEDEDSSDDSDPDLDAD
LDLELGPEGEGGSELNGLGPTRNMGRFAGELLMPLMKSIYSNADKLNRRQ
AAAVVAHLVRPGKAGGGFAKCLVSKLREHSPVKCLEVHMATLRVFYDKWV
MSIAAAGDDAGDGDGDANLTDDEKMHKQWEQDQAGMDRWLPLARRLSMSL
GVGPLRSRDPAEQKTLQDLFLGFMKVGVRFALDPEGDRLLFLEGMREYAS
KVTPRQKKVLGKAFDDEAKSLHDNVLEEGRDFAPVWDSGDTQASAERKGN
GREKLCQQDVAPRWRAFFSFRNSLSPGSAASFIPDTNSNSAGSGYGSGAD
ALSLSPPNSINGSSVGTRTPASVGRLVRMGGSAMATSSISGGSGGSAKRR
GRVTGRTASARNLGRMSMASAASDLLPVAEEGLFQVRALSGN
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