prot_L-elsbetiae_contig9853.18797.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9853.18797.1
Unique Nameprot_L-elsbetiae_contig9853.18797.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length216
Homology
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BLAST of mRNA_L-elsbetiae_contig9853.18797.1 vs. uniprot
Match: D8LQ35_ECTSI (Galactinol--sucrose galactosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ35_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.940e-53
Identity = 121/204 (59.31%), Postives = 130/204 (63.73%), Query Frame = 0 
Query:    1 DDRAWTVVAST-HDYKATWTF-MSKTKFGRHLCLHRFKLWWLKPSHGHSGLNIPPETALLLAELHPPPLPSPTNTRSTAXXXXXXXXXXXXHRPEYVVLLPVSDTRARASLHRAGDDNVVAGAAPDAGVSGTPSSSXXXXXSGAAPDHD-PSVLAVSADTGDVATLLPGRLDVLLVATGPDPFRLVRRLVQEATDRLRAQLLSL 201
            DD  W V AST +   ATWTF +    FGRHLCLHRFKLWWLKPSHGHSGL+IPPETAL LAE+ P                      XXX    YV LLPVSDT ARASLHRAGDD+               S+      SGAA D D PS LAVSADTGD ATLLP  L VLLVATGPDPFRLV+RLV+EATDRL  QL+SL
Sbjct:   25 DDHCWIVEASTCNSDAATWTFGIQPGNFGRHLCLHRFKLWWLKPSHGHSGLDIPPETALFLAEMQP---------------------QXXXXXXXYVALLPVSDTHARASLHRAGDDS---------------SNGEGLSPSGAAVDEDSPSALAVSADTGDPATLLPDTLGVLLVATGPDPFRLVQRLVREATDRLSTQLVSL 192
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BLAST of mRNA_L-elsbetiae_contig9853.18797.1 vs. uniprot
Match: A0A835YGP5_9STRA (Galactinol--sucrose galactosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGP5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.590e-6
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:   32 LHRFKLWWLKPSHGHSGLNIPPETALLLAELHPPP 66
            LH+FKLWW+KP+HG  G ++PPET LLL+E+ P P
Sbjct:  186 LHKFKLWWMKPTHGRRGSDVPPETQLLLSEMPPDP 220
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9853.18797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ35_ECTSI1.940e-5359.31Galactinol--sucrose galactosyltransferase n=2 Tax=... [more]
A0A835YGP5_9STRA3.590e-662.86Galactinol--sucrose galactosyltransferase n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008811Glycosyl hydrolases 36PFAMPF05691Raffinose_syncoord: 25..118
e-value: 8.1E-7
score: 27.2
IPR008811Glycosyl hydrolases 36PANTHERPTHR31268FAMILY NOT NAMEDcoord: 22..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9853contigL-elsbetiae_contig9853:3961..5348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9853.18797.1mRNA_L-elsbetiae_contig9853.18797.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9853 3959..5348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9853.18797.1 ID=prot_L-elsbetiae_contig9853.18797.1|Name=mRNA_L-elsbetiae_contig9853.18797.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp
DDRAWTVVASTHDYKATWTFMSKTKFGRHLCLHRFKLWWLKPSHGHSGLN
IPPETALLLAELHPPPLPSPTNTRSTAAAVAAPPPRQQQHRPEYVVLLPV
SDTRARASLHRAGDDNVVAGAAPDAGVSGTPSSSPPPSSSGAAPDHDPSV
LAVSADTGDVATLLPGRLDVLLVATGPDPFRLVRRLVQEATDRLRAQLLS
LSLEEGRGPAAAAAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008811Glycosyl_hydrolases_36