prot_L-elsbetiae_contig9800.18758.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig9800.18758.1
Unique Name	prot_L-elsbetiae_contig9800.18758.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	189

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 2.850e-108
Identity = 162/188 (86.17%), Postives = 172/188 (91.49%), Query Frame = 0

Query:    1 MFRRASTLASRAVVGARRLHTEAKLQEMGIELPTPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLGDLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDDRKGNKKDGDDWTVVKRP 188
            M RR S+L  RA V  RR+HTEAKL+E+GIELPTPK PLGNFVMTVRTGNLLYTSGHLP SLEGE TTGKVGQE++EEEAQEAARKVAIQ+IASIK+DLGDLDRVTR+VKLVGFVNCTDGF GQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD  G KK  DDWTV+KRP
Sbjct:    1 MLRRVSSLVGRAAVRPRRVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD--GGKKGDDDWTVLKRP 186

[Close]

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.240e-69
Identity = 101/162 (62.35%), Postives = 134/162 (82.72%), Query Frame = 0

Query:   10 SRAVVGARRLHTEAKLQEMGIELPTPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLGDLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            S  + G++++HTEAKL EMG++LP+P  P GNF M V++G ++Y SGHLP    G++ TGKVG EVS EEAQ AA+ +A+ +++S+K+++GDLDRV R+VKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE +D
Sbjct:   23 STTIAGSQKIHTEAKLTEMGLKLPSPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 184

[Close]

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.300e-68
Identity = 101/162 (62.35%), Postives = 133/162 (82.10%), Query Frame = 0

Query:   10 SRAVVGARRLHTEAKLQEMGIELPTPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLGDLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            S  + G++++HTEAKL EMG++LP P  P GNF M V++G ++Y SGHLP    G++ TGKVG EVS EEAQ AA+ +A+ +++S+K+++GDLDRV R+VKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE +D
Sbjct:   74 STTIAGSQKIHTEAKLTEMGLKLPPPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 235

[Close]

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Match: A0A5A8CF06_CAFRO (YjgF_endoribonc domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CF06_CAFRO)

HSP 1 Score: 207 bits (527), Expect = 2.680e-65
Identity = 102/175 (58.29%), Postives = 133/175 (76.00%), Query Frame = 0

Query:    4 RASTLASRAV-------VGARRLHTEAKLQEMGIELPTPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLGDLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            RA+T A RA        + AR +HTEAK++EMG++LPTP  P  N++M  R GNLL+T+GHLP+  +G++  GKVG++ + EEA  AAR+ A+ I+ ++K ++GDLD+V RVVKL GFVNC D F+ QPKV+NGASD   EV GERGVH RSAVGTNALPMNVPVE+EAI+E D+
Sbjct:    5 RAATAAMRATSAPAVRALAARGVHTEAKIEEMGLKLPTPPTPAANYIMCHRVGNLLFTAGHLPMQEDGQLFNGKVGKDFTTEEAYTAARQCALAILGTVKAEIGDLDKVKRVVKLTGFVNCVDAFSAQPKVLNGASDFMGEVLGERGVHVRSAVGTNALPMNVPVEVEAIIEIDE 179

[Close]

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Match: A0A485KSR4_9STRA (Aste57867_10922 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSR4_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.640e-62
Identity = 96/172 (55.81%), Postives = 127/172 (73.84%), Query Frame = 0

Query:    1 MFRRASTLASRAVVGARRLHTEAKLQEMGIELPTPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLGDLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDDR 172
            MFR A      A    RR+HTE +++E+G  LP    P GN+   VR+GNLL+T+GHLP    GE+  GKVG++++ E+  EAAR VA+ + A++K++LGDLDRV R+VK+VGFVNC DGFT QP V+NG SD   E+FGERGVH+RSAVGTNALP+ +PVE+E IVE +D+
Sbjct:    1 MFRSAVAAFKPAAAAVRRVHTENRIKELGYTLPAVATPKGNYRNVVRSGNLLFTAGHLPQPAGGELIKGKVGEDLTAEQGYEAARHVALAVCATLKQELGDLDRVKRIVKVVGFVNCVDGFTAQPSVINGFSDTVGEIFGERGVHARSAVGTNALPLGIPVEVECIVEVEDK 172

[Close]

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 198 bits (504), Expect = 7.330e-62
Identity = 93/153 (60.78%), Postives = 124/153 (81.05%), Query Frame = 0

Query:   17 RRLHTEAKLQEMGIELPTPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLGDLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF 169
            R +  EA+L + GI+L  P PP GN+V  VR+GN L+ +GH+P+  +  +  GKVG++V+ E+A   AR+VAI I++++K +LGDLDRVTR+VKLVGFVNCTD FTGQP V+NGASDLF EVFG++GVH+RSAVGTNALP+ +PVEIEA++EF
Sbjct:   19 RGVQIEARLAQRGIQLSDPVPPKGNYVPAVRSGNTLFLAGHIPLMPDNNLAKGKVGKDVTPEQANAIARQVAINILSTLKVELGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFGKKGVHARSAVGTNALPLGIPVEIEAVIEF 171

[Close]

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.130e-61
Identity = 93/150 (62.00%), Postives = 122/150 (81.33%), Query Frame = 0

Query:   22 EAKLQEMGIELPTPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLGDLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            EA+L ++GI+LP    P GN+ + VRTGNLL+ +GH+P+   G + TGKVG + S EE QEAA+ +AI ++A++K +LGDLD+V R+VKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE +D
Sbjct:    5 EARLAQLGIDLPDVIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 154

[Close]

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Match: A0A6S9K1N5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K1N5_HETAK)

HSP 1 Score: 197 bits (501), Expect = 2.230e-61
Identity = 97/174 (55.75%), Postives = 132/174 (75.86%), Query Frame = 0

Query:    1 MFRRASTLASRAVV---GARRLHTEAKLQEMGIELPTPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLGDLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            + RRA+ +  ++ V    AR++H E +++E+G +LP  KPP GNFV+  R GNLLYT+GHLP   +G++  GKVG++V  + A +AA+ V + I+A++K ++GDLDRV  VVKL+GFVNC DGF  QP+VVNG SDL  E+FG++G HSRSAVGTNALP+NVPVEIEAI E +D
Sbjct:    4 LLRRANGVIPKSSVLVNAARQIHIEQRIEELGYKLPEMKPPAGNFVLVKRIGNLLYTAGHLPQPADGDLMLGKVGEDVDMDTAYKAAQCVGLNILATVKAEVGDLDRVRNVVKLMGFVNCPDGFRAQPQVVNGCSDLMVEIFGDKGRHSRSAVGTNALPLNVPVEIEAIFEVED 177

[Close]

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Match: A0A8K1FK53_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK53_PYTOL)

HSP 1 Score: 194 bits (493), Expect = 2.830e-60
Identity = 91/158 (57.59%), Postives = 122/158 (77.22%), Query Frame = 0

Query:   14 VGARRLHTEAKLQEMGIELPTPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLGDLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            VG R +H E +LQE+G  LP    P GN+   VRTGN ++T+GHLP    G++  GK+G++++ E+  +AA  VA+ +IA++K +LGDLD+V R+VKLVGFVNC DGFTGQP V+NGASD   +VFGE+GVH+RSAVGTNALP+NV VE+EAIVE ++
Sbjct:   12 VGVRHVHIERRLQELGYALPAVAEPKGNYRTCVRTGNYVFTAGHLPQPTGGDLIVGKIGKDLTPEQGYDAAHHVALSLIATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGEKGVHARSAVGTNALPLNVAVEVEAIVEIEE 169

[Close]

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Match: A0A2R5GI79_9STRA (Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI79_9STRA)

HSP 1 Score: 194 bits (493), Expect = 4.440e-60
Identity = 94/158 (59.49%), Postives = 125/158 (79.11%), Query Frame = 0

Query:   12 AVVGARRLHTEAKLQEMGIELPTPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLGDLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF 169
            A V  R +HTEAKL+++G  LP    P G++ + VR+GN ++T+GHLP    G++  GKVG ++S EEA +AA+  A+ I+A++K +LGDLDRV RVVK+VGFVNC DGF  QP+V+NGASDLFAEV GERG+H+RSAVGTN+LP+N+PVE+EAIVE 
Sbjct:   24 APVLMRGVHTEAKLEKLGYTLPQVASPKGSYQLCVRSGNQMFTAGHLPQPANGDLLVGKVGVDLSVEEANKAAQYCALSILATLKAELGDLDRVARVVKVVGFVNCADGFAQQPQVINGASDLFAEVLGERGLHARSAVGTNSLPLNIPVEVEAIVEI 181

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig9800.18758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXY4_9PHAE	2.850e-108	86.17	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR9_9STRA	1.240e-69	62.35	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
W7TB75_9STRA	1.300e-68	62.35	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
A0A5A8CF06_CAFRO	2.680e-65	58.29	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A485KSR4_9STRA	1.640e-62	55.81	Aste57867_10922 protein n=1 Tax=Aphanomyces stella...	[more]
A0A835Z1E3_9STRA	7.330e-62	60.78	Putative translation initiation inhibitor n=1 Tax=...	[more]
A0A4D9CNR0_9STRA	2.130e-61	62.00	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A6S9K1N5_HETAK	2.230e-61	55.75	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A8K1FK53_PYTOL	2.830e-60	57.59	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A2R5GI79_9STRA	4.440e-60	59.49	Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 22..164 e-value: 1.9E-29 score: 102.7
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 17..169 e-value: 6.4E-63 score: 212.7
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 20..168
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 20..170

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig9800	contig	L-elsbetiae_contig9800:1287..4918 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig9800.18758.1	mRNA_L-elsbetiae_contig9800.18758.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig9800 1237..5687 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig9800.18758.1 ID=prot_L-elsbetiae_contig9800.18758.1|Name=mRNA_L-elsbetiae_contig9800.18758.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp
MFRRASTLASRAVVGARRLHTEAKLQEMGIELPTPKPPLGNFVMTVRTGN
LLYTSGHLPISLEGEMTTGKVGQEVSEEEAQEAARKVAIQIIASIKRDLG
DLDRVTRVVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAV
GTNALPMNVPVEIEAIVEFDDRKGNKKDGDDWTVVKRP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013813	Endoribo_LPSP/chorism_mut-like
IPR035959	RutC-like_sf