prot_L-elsbetiae_contig98.18749.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig98.18749.1
Unique Nameprot_L-elsbetiae_contig98.18749.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1300
Homology
BLAST of mRNA_L-elsbetiae_contig98.18749.1 vs. uniprot
Match: A0A6H5KNY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY7_9PHAE)

HSP 1 Score: 661 bits (1706), Expect = 3.960e-218
Identity = 426/820 (51.95%), Postives = 535/820 (65.24%), Query Frame = 0
Query:  462 LRAQHGVLVEDSGRSHSDAAKRGSGGDEGLRERTLLTAACWQLRDNDDDRSPEAAEEAGQDGDAALEMAAVALAAGLTTSASPGLARKIQDALLEWEGQARPLEDKLIASASRIRWMYVLRLAVELGQCDQSQWEEVQQSLVVTPPRGGPVDLKGLYSTREDVHALLRASPGG-GPLLGGGVFPRLTESRGELTRLIERGQARLARLNALLRVLWEDESSGVTSVSPAKHRAGALNELVGVVIGESRLRPGVALRLFSALGSDAIRRARSGCEEVPPELARDVASLRLTPGGVVADEGAQRAAVAATELCAVLRIVGALAKGRNDESLRSPELVRRGAALQGELRGRIKNYSRPPDGRRRQAADVLGAAEDFVAELPPEPSEHGPGNSHLDLMVYLLGVVTSGRHQGPGDLFKSDATPDVLPGEDSVLLSSGETGPAQCDVSDVVRGDSANAEKEPQKSSADRSADGPEKRSGRQLGERGSLAEILAKIASAMPCDPDQTLASIWGAVKAS---LKISRPRGTEEAEAEVFELAIDAQVLEALNRSLHEAVEAPGRKGPSPALCDLPSAGTAQAPTPDAAERAAISWMPMEGHAPPSFGSVVHLGEENKTLQRQAEALRFKSTMNIVARTGLPLQDPVEAGRVTSVGALVAAATLAKRWKSAALNDGSGLGRPELERLNYLVDKRVENLSTQLTKLEKSNNDLARIMATPRVVAGEAVLSPESWAVREVQRLNGRIRVHRERLHSVETRLKGIRMG-KVALGDMETLWMTPDEREAMESNLRLISRKIAKANFLLRTMRSRWDVFREKHRHLALLVQDRL 1276
            LRAQH VLVED  RS S  A  G   D+ LR+ +LLTAACWQLRDN    S +A  E G    AALE+AA  +AAGLT SAS  L+R++ D L  WEGQA PLE KL+  ASR+RWMY++RLAVELG CD ++WEE    L+  P +  P+DL+ L+ TR+ +HAL     GG GPLL GGVFPR TESRGEL  LIERG +RLAR N LLR +W  ES+G T     + R  ALN LVGV++GES+L P  AL+LFSALG D IRRA+S  ++VP  L  ++A+L L+ GGV++ E +QRAA+A T+L A++RI   L+K R++ SL   +L +RGAALQ ELR ++K Y+     +RR+  +VL AAEDF+AE+PPE +EHGPGNS LD+M +LLG + +G             TP            SG+   AQ  V D     S ++ ++   S  DR    P K+   +L  RG+L EI AKIASAMPCDPDQ +AS W  ++AS    ++ RPRG EE E E FELA+DAQ LE L  SL  A++ P R      LCDLP +   +   P +     I+ +P+ G        V H  +E K LQRQAEA+R+K+ MNIVARTGL LQ P EAG   S+ A+VAAA  AKRWKSAA +D SGLGRPELERLN ++D R+ +LS QL  L +S   +    A       E VLSP+ W  RE QRLN RIR+ +E+LH +ETRL+ IR G K   GD+E +WM+ DER  ME+NL LISRKIAKANFLLR MRSRWD+FRE+HRHLA LV DRL
Sbjct:    2 LRAQHCVLVEDLQRSES--ADVGED-DDPLRQASLLTAACWQLRDNG---SSDAGNEQGTT--AALELAAAVVAAGLT-SASSDLSRRMMDTL-RWEGQAPPLEGKLVGIASRVRWMYLVRLAVELGLCDLNEWEEALH-LLAEPKK--PIDLESLHETRQGIHALFHGFRGGDGPLLLGGVFPRSTESRGELVSLIERGHSRLARFNVLLRAIWS-ESAG-TGRGSFEERTEALNTLVGVMLGESQLHPSFALKLFSALGLDVIRRAKSSPDKVPQSLQGEIANLGLSSGGVLS-EASQRAALAVTKLAALVRISEVLSKSRDELSL---DLAQRGAALQAELRVQVKAYAEHQQSQRRE--EVLSAAEDFIAEMPPEEAEHGPGNSQLDIMTHLLGAIITG-------------TP------------SGKEARAQSGVPDAAMVGSNHSSEQALASPTDRRTPDPMKQDRHRLDARGNLLEIFAKIASAMPCDPDQYVASAWRTMQASRTLARMERPRGDEEVELEAFELAVDAQALETLRESLLGAIDRPERN-----LCDLPVSVNGEIEQPLSGGIRLIT-VPLSGL------EVTH-DDEMKALQRQAEAVRYKNAMNIVARTGLALQPPAEAG-TPSLTAIVAAAKHAKRWKSAAQDDVSGLGRPELERLNSIMDMRITSLSDQLATLVRSKK-VEPGTAKQTKADHEVVLSPDDWVKRERQRLNVRIRIRKEKLHGMETRLRHIRKGDKGRTGDVEAIWMSEDERLEMETNLFLISRKIAKANFLLRKMRSRWDIFRERHRHLAPLVHDRL 760          
BLAST of mRNA_L-elsbetiae_contig98.18749.1 vs. uniprot
Match: D7FJK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK7_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 4.230e-130
Identity = 310/683 (45.39%), Postives = 383/683 (56.08%), Query Frame = 0
Query:  503 QLRDNDDDRSPEAAEEAGQDGDAALEMAAVALAAGLTTSASPGLARKIQDALLEWEGQARPLEDKLIASASRIRWMYVLRLAVELGQCDQSQWEEVQQSLVVTPPRGGPVDLKGLYSTREDVHALLRASPGG-GPLLGGGVFPRLTESRGELTRLIERGQARLARLNALLRVLWEDESSGVTSVSPAKHRAGALNELVGVVIGESRLRPGVALRLFSALGSDAIRRARSGCEEVPPELARDVASLRLTPGGVVADEGAQRAAVAATELCAVLRIVGALAKGRNDESLRSPELVRRGAALQGELRGRIKNYSRPPDGRRRQAADVLGAAEDFVAELPPEPSEHGPGNSHLDLMVYLLGVVTSGRHQGPGDLFKSDATPDVLPGEDSVLLSSGETGPAQCDVSDVVRGDSANAEKEPQKSSADRSADGPEKRSGRQLGERGSLAEILAKIASAMPCDPDQTLASIWGAVKASLKISRPRGTEEAEAEVFELAIDAQVLEALNRSLHEAVEAPGRKGPSPALCDLPSAGTAQAPTPDAAERAAISWMPMEGHAPPSFGSVVHLGEENKTLQRQAEALRFKSTMNIVARTGLPLQDPVEAGRVTSVGALVAAATLAKRWKSAALNDGSGLGRPELERLNYLVDKRVENLSTQLTKLEKSNNDLARIMATPRVVAGEAVLSPESWAVR 1184
            +LRDN    S +A  E G    AALE+AA  +AAGLT S S  L+R++ D L  WEGQA PLEDKL+  ASR+RWMY++RLAVELG CD S+W+EV  +L+  P +  P+DL  LY TR+ +HAL     GG GPLL  GVFPR TESRGEL  LIERGQARLA+LN LLR LW  ES+G T     + R  ALN LVGV++GES+L P  AL+LFSALG D IRRA+SG ++VP  L  D+A+L L+ GGV++ E +QRAA+A T+L A+ RI  AL+K R++ SL   ++ +RGAALQ ELR                   V G   D              G++H       L   T  R            TPD                                                P K+   +L  RG+L EI AKIASAMPCDPDQ +AS W  ++A  +I RPRG EE E E FELA+DAQ LE L  SL EA+  P R      L DLP +   +   P +     I+       AP S   V H  +E K LQRQAEA+R+K+ MNIVARTGL L  P   G   S+ A VAAA  AKRW+SAA +DGSGLGRPELERLN +++ R+ NLS QL  L +S N +    A       E VLSP+ W  R
Sbjct:   18 KLRDNG---SSDAGNEQGTA--AALELAAAVIAAGLT-SGSSDLSRRMMDTL-RWEGQAPPLEDKLVGIASRVRWMYLVRLAVELGLCDLSEWQEVS-NLLAEPKK--PIDLGSLYETRQGIHALFHGFRGGDGPLLLDGVFPRSTESRGELVSLIERGQARLAKLNVLLRALWS-ESAG-TGRGSFEDRTEALNTLVGVMVGESQLHPNFALKLFSALGLDVIRRAKSGPDKVPQSLQGDIANLGLSSGGVLS-EASQRAALAVTKLAALARISEALSKSRDELSL---DVAQRGAALQAELR-------------------VQGGVPDAAMV----------GSNHSSEQA--LASPTDRR------------TPD------------------------------------------------PMKQDRHRLDARGNLLEIFAKIASAMPCDPDQDVASAWRTMQA--RIERPRGDEEVELEAFELAMDAQALETLRESLLEAIHRPERN-----LFDLPVSVNEEIEQPLSGGIRLIT-------APLSGSEVTH-DDEKKALQRQAEAVRYKNAMNIVARTGLALPSPAGVG-TPSLTAFVAAAKHAKRWRSAAQDDGSGLGRPELERLNSIMEMRITNLSDQLATLVRSKN-VEPGTAKQTKADHEVVLSPDDWVKR 576          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig98.18749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNY7_9PHAE3.960e-21851.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJK7_ECTSI4.230e-13045.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 380..400
NoneNo IPR availableCOILSCoilCoilcoord: 203..223
NoneNo IPR availableCOILSCoilCoilcoord: 252..272
NoneNo IPR availableCOILSCoilCoilcoord: 332..359
NoneNo IPR availableCOILSCoilCoilcoord: 1143..1163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig98contigL-elsbetiae_contig98:4664..19932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig98.18749.1mRNA_L-elsbetiae_contig98.18749.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig98 4662..19932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig98.18749.1 ID=prot_L-elsbetiae_contig98.18749.1|Name=mRNA_L-elsbetiae_contig98.18749.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1300bp
QSLISQEEDETNDNRAAYQRFFVSIVDSTDKLDRLLAAIDTPTRANDEPN
RARRISDEDHGVYDYGTTDNTIQFNIEEEAAERAELAKSLRQLGGGLASD
AGVIDLRAVAFWCLAKRERLWAEDEKLTSAEQASLRSIRAMQVNHEEVDT
VLNGRKEKLEDKIMHMQRGVGTQSKGWSEILLNVKDGVVKSRLHAQKRTH
DILSATEERIAALKAELAESEYHVVGLFNESEDFIRAKNAYARKAELLQH
IVEQQRARLAQISADFQRTTKEAGSLDDSMQNIAKLESAAEGCGKGAVPS
KEQTEGREKLQALVREEARRGREEQIQAVSRRAGLLEENKRLRAEIEKAE
SVLSQLETPAESKKSNLRLHQTEASHRDSVKDLEAQVESETQNLAQTERQ
LSRLPRKVGRSPAEGSPPTAAAKLDQQPQSSPTTRDKHEEHSVPGREENR
VDAQAWYRLETLRAQHGVLVEDSGRSHSDAAKRGSGGDEGLRERTLLTAA
CWQLRDNDDDRSPEAAEEAGQDGDAALEMAAVALAAGLTTSASPGLARKI
QDALLEWEGQARPLEDKLIASASRIRWMYVLRLAVELGQCDQSQWEEVQQ
SLVVTPPRGGPVDLKGLYSTREDVHALLRASPGGGPLLGGGVFPRLTESR
GELTRLIERGQARLARLNALLRVLWEDESSGVTSVSPAKHRAGALNELVG
VVIGESRLRPGVALRLFSALGSDAIRRARSGCEEVPPELARDVASLRLTP
GGVVADEGAQRAAVAATELCAVLRIVGALAKGRNDESLRSPELVRRGAAL
QGELRGRIKNYSRPPDGRRRQAADVLGAAEDFVAELPPEPSEHGPGNSHL
DLMVYLLGVVTSGRHQGPGDLFKSDATPDVLPGEDSVLLSSGETGPAQCD
VSDVVRGDSANAEKEPQKSSADRSADGPEKRSGRQLGERGSLAEILAKIA
SAMPCDPDQTLASIWGAVKASLKISRPRGTEEAEAEVFELAIDAQVLEAL
NRSLHEAVEAPGRKGPSPALCDLPSAGTAQAPTPDAAERAAISWMPMEGH
APPSFGSVVHLGEENKTLQRQAEALRFKSTMNIVARTGLPLQDPVEAGRV
TSVGALVAAATLAKRWKSAALNDGSGLGRPELERLNYLVDKRVENLSTQL
TKLEKSNNDLARIMATPRVVAGEAVLSPESWAVREVQRLNGRIRVHRERL
HSVETRLKGIRMGKVALGDMETLWMTPDEREAMESNLRLISRKIAKANFL
LRTMRSRWDVFREKHRHLALLVQDRLLYGYHAPGWSGDRAEGALGGMVSA
back to top