prot_L-elsbetiae_contig9767.18724.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9767.18724.1
Unique Nameprot_L-elsbetiae_contig9767.18724.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length125
Homology
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Match: A0A6H5KTI9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI9_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.580e-31
Identity = 56/76 (73.68%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    2 MRFRGGSRNFLSVDHEDDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRCIDEWLGRSSLCPLCNTSVDVAEDSHVT 77
            M+++  SR  L  +H ++DKVSCRVCLS+YE G+TLRILPCLHKFH+ CIDEWLGRS LCPLCNTSV+VAEDSHVT
Sbjct:  904 MQYQESSRKVLVAEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRVCIDEWLGRSVLCPLCNTSVEVAEDSHVT 979          
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Match: A0A7S2Y0A3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.250e-25
Identity = 45/59 (76.27%), Postives = 48/59 (81.36%), Query Frame = 0
Query:   17 EDDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRCIDEWLGRSSLCPLCNTSVDVAEDSH 75
            EDDDKVSCRVCLSEY+DG  LR+LPC HKFH+ CIDEWL RS  CPLCNTSVD A   H
Sbjct:  133 EDDDKVSCRVCLSEYQDGECLRVLPCFHKFHKGCIDEWLERSVCCPLCNTSVDKALQQH 191          
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Match: A0A835ZD21_9STRA (FAD dependent oxidoreductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD21_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.640e-18
Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 0
Query:   18 DDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRCIDEWL-GRSSLCPLCNTSVDVAEDSH 75
            D+DK+SCRVCL EYE G+ LRILPCLH++H  C+DEWL  RS  CPLCNTSV V    H
Sbjct:  264 DEDKISCRVCLCEYEAGDELRILPCLHRYHVHCVDEWLVKRSPACPLCNTSVAVVLHGH 322          
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Match: L8HAL1_ACACA (Zinc finger (C3HC4type RING finger) family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HAL1_ACACA)

HSP 1 Score: 76.3 bits (186), Expect = 1.070e-15
Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   18 DDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRCIDEWLGRSSLCPLCNTSVDVAEDSH 75
            D+   +C +CL EYEDG  L+ LPCLH +HQ CIDEWL  + LCP+C   V  A  ++
Sbjct:   37 DEQLTTCTICLVEYEDGELLKTLPCLHSYHQECIDEWLSGNKLCPICKFDVTTAPSTY 94          
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Match: A0C0B5_PARTE (RING-type domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0C0B5_PARTE)

HSP 1 Score: 80.1 bits (196), Expect = 4.780e-15
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    8 SRNFLSVDHEDDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRCIDEWLGRSSLCPLCNTSVD 69
            S  F++    DD+ + C +CL +YE+   +R +PC H FHQ CID+WL +S+LCP+C T VD
Sbjct:  419 SMEFINQHQNDDNHIKCMICLEDYEENQIVRTMPCWHYFHQECIDKWLHKSTLCPICKTEVD 480          
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Match: A0A7S2QJ38_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QJ38_9DINO)

HSP 1 Score: 75.1 bits (183), Expect = 2.110e-14
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0
Query:   18 DDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRCIDEWLGRSSLCPLCNTSVDVAEDSHVTA 78
            DD+   C VC+  YE G++LR LPCLH +HQ CIDEWL RS  CP+C  ++   E   +TA
Sbjct:  106 DDETSKCMVCMEAYEAGDSLRTLPCLHVYHQSCIDEWLARSPECPVCKRNITAVELPPLTA 166          
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Match: A0A8B8DAP1_CRAVI (RING finger protein 44-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DAP1_CRAVI)

HSP 1 Score: 72.4 bits (176), Expect = 4.950e-14
Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:   13 SVDHEDDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRCIDEWLGRSSLCPLCNTSVDVAE 72
            +VD+E+D    CR+C++++ DG  +  LPC H FH+ CID WL R ++CP+C  SVDV E
Sbjct:   52 NVDNENDS--DCRICITDFSDGEIIVTLPCKHIFHKTCIDTWLKRKAICPICRGSVDVKE 109          
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Match: A0A812WUW4_9DINO (RNF167 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812WUW4_9DINO)

HSP 1 Score: 77.0 bits (188), Expect = 6.050e-14
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    8 SRNFLSVDHEDDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRCIDEWLGRSSLCPLCNTSVDVAED 73
            +R   ++DH   D+  C VCL E+ DG+ ++ LPCLH +HQRC+D+WL   + CP+C T +D  ED
Sbjct:  551 TRKLQNLDHLG-DQTKCLVCLEEFADGDEVKTLPCLHFYHQRCVDQWLATDNSCPVCKTPIDQPED 615          
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Match: UPI001C4ACC95 (E3 ubiquitin ligase BIG BROTHER-related-like n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4ACC95)

HSP 1 Score: 72.4 bits (176), Expect = 6.050e-14
Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    8 SRNFLSVDHEDDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRCIDEWLGRSSLCPLCNTSVDVAED 73
            SR++ + + +DD+   C +C  EYEDG++L +L C HK+H  CI++WL  + +CP+CN  V   E+
Sbjct:   51 SRSYKAENMQDDNAEQCAICRLEYEDGDSLVVLSCKHKYHPECINKWLQLNKVCPICNAQVSTPEN 116          
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Match: D7FJG1_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG1_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 6.520e-14
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0
Query:   18 DDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRCIDEWLGRSSLCPLCNTSVDVA 71
            DDD ++CR+CLS+Y+ G+ +RILPC H+FH   ID+WL R+  CPLC+  +  A
Sbjct:  119 DDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRNVCCPLCHLDISKA 172          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9767.18724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTI9_9PHAE2.580e-3173.68RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2Y0A3_9STRA2.250e-2576.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZD21_9STRA5.640e-1866.10FAD dependent oxidoreductase-domain-containing pro... [more]
L8HAL1_ACACA1.070e-1550.00Zinc finger (C3HC4type RING finger) family protein... [more]
A0C0B5_PARTE4.780e-1546.77RING-type domain-containing protein n=1 Tax=Parame... [more]
A0A7S2QJ38_9DINO2.110e-1450.82Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A8B8DAP1_CRAVI4.950e-1448.33RING finger protein 44-like n=1 Tax=Crassostrea vi... [more]
A0A812WUW4_9DINO6.050e-1445.45RNF167 protein n=1 Tax=Symbiodinium sp. CCMP2592 T... [more]
UPI001C4ACC956.050e-1440.91E3 ubiquitin ligase BIG BROTHER-related-like n=1 T... [more]
D7FJG1_ECTSI6.520e-1451.85RING-type domain-containing protein n=2 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 24..64
e-value: 1.4E-8
score: 44.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 23..65
e-value: 1.9E-13
score: 50.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 24..65
score: 12.593
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 23..65
e-value: 0.0045
score: 10.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 8..75
e-value: 5.3E-20
score: 72.4
NoneNo IPR availablePANTHERPTHR45931FAMILY NOT NAMEDcoord: 9..69
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 15..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9767contigL-elsbetiae_contig9767:5783..7209 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9767.18724.1mRNA_L-elsbetiae_contig9767.18724.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9767 4258..7230 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9767.18724.1 ID=prot_L-elsbetiae_contig9767.18724.1|Name=mRNA_L-elsbetiae_contig9767.18724.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp
MMRFRGGSRNFLSVDHEDDDKVSCRVCLSEYEDGNTLRILPCLHKFHQRC
IDEWLGRSSLCPLCNTSVDVAEDSHVTAAAAAEAAAEAAAEAAAVRAANH
DDDGPLPGIASSNQHLSRIRGRYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD