prot_L-elsbetiae_contig9527.18508.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9527.18508.1
Unique Nameprot_L-elsbetiae_contig9527.18508.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length983
Homology
BLAST of mRNA_L-elsbetiae_contig9527.18508.1 vs. uniprot
Match: A0A6H5KG45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG45_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 7.330e-44
Identity = 469/1117 (41.99%), Postives = 510/1117 (45.66%), Query Frame = 0
Query:    1 QLEACLTAVAAAEELEVSLPALRALAQFHMGDLRACLFTLQVCKGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------RAXXXXXXXXXXXXXXXXXXXXXXPVLAAASPSXXXXXSA--------CCRHLADHVESCDAAAHTLAFDTFFPALAAEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-----------------------------GEG-----GCWKPPFSGRWPQVWAVSPSFVHAAAERPPAAGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGLGEMQGXXXXXXXXXXEHRVLITGRNFAHPAGGPADSPVAGATGDGG-----------VDIAGRRRGAAGDGAPGXXXXXXXXXXXXXXXXXXXXXXXXXXQQTQDGDGDGGGSRRCPVRQVLVRFGRDL-VPGRVVSDTLVEAFAPARTEPGFVEVAVVVAGRGRXXXXXXXXXXXXXXXXGGLASDAPVST-ACSEEEGWWFGRRHCPLLRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GAVPGAGAGESSASDGMGV---------AVVVNGRYGPVSSEDXXXXXXXXXXXXXXXXXXXXXXXXQPKRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVAAEASSGIGESGDSRGTRKDSPEMLQATSAPAVCEAEPMAGGVEAVPDAKPTGAADGPCGDGVGVAAAAASAPGQETPPAGAEKAAAPTGAXXXTATXTGLXXXXXXXXXXXXXXXXXXXXLSAGLXXXXXXXXXXXXXXXXXXXXXXXAAAAAAAAITPXXXXXXXXXXXXXX--PPPALPASAPPXXXXXXXXXTPAPVTATXXXXXXXXXXXYRPPTPAQAEWERGLASLLADTCSLADAFSAADAIGGVSLGRGLAGAGPPPADGGDHFLTVAGPPWAGQDVRVIQG 982
            +LEACLTAVAAAE L+VSL ALRALAQ+HMGDLRACLFTLQ CKGRR            XXXXX                           XXXXXX                                                            R+    XXXXXXXXX      XXX     +SPS      A        C RHLA HV+S  AA+H LAFDTF PALAAEQA                                                                                   GEG     G W+ PF  RWP+VWAVSP+FVH  A    A  P                   XXXXXXXXXXXXXXXXXXXXXXXXX T     QG           HR+LITGRNFAHP      S V G+ G              V+      G+ GD   G                               G GDG   RR   R+VLVRFGRDL VPG V+SDTLVEAFAPAR+E GFV+VAVVV                     G LASD+ ++T A +E+ GW FGRRH P+LRY   XXXXXXXXXXXXXXXXX                                        XX          A  G  A      +G G          AVVVNGRYGPV  +D  XXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L    A++G G +GDS  T       + AT+  +        G +   P     G  D   GDG  VAA  A A       A AE A    G           XXXXXX               +AG XXXXXXXXXXXXXXXXX        +AA + I  XXXXXXXXXXXXXX  PP A+P                                 Y  PT AQAE ER LASL+ADT SLAD FSA+DAIGGVSLGRGL GAGPPPA GGDHFLT+AGPPW  QD RV+ G
Sbjct:  168 ELEACLTAVAAAERLDVSLGALRALAQYHMGDLRACLFTLQACKGRRRQANKQSTWSSAXXXXXGGACSAVDITEPTPPLRQGAVSTPPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKEPSEDRSENGSKAAASSPEDCSKNYRSKASSXXXXXXXXXDHSGGYXXXXXXXXSSPSAIATVPAVVWVGEASCRRHLAHHVDSDYAASHALAFDTFLPALAAEQAVAAATAAKEEASLAPPETMGIATHPASAPSQGMTTEACLAPGAGTGAHGRTAAAAVKGQGVMMGATTTATTSSTAEESVAVSLGEGNSGGDGRWEVPFFRRWPEVWAVSPTFVHTTAVEADAVHPLFDRKGSAGVTVSGKGSSSXXXXXXXXXXXXXXXXXXXXXXXXXGTDRSSSQG-----------HRILITGRNFAHPVAAADASTVLGSDGXXXXXXXXXXXXXXVERVVGTSGSGGDSFTGEASGRRELEQAGGKTAGKGDYLADDG----GGGGDGDEIRRSNTRRVLVRFGRDLTVPGEVLSDTLVEAFAPARSEIGFVDVAVVVVAES-------------GAAGGDLASDSIIATTAAAEQHGWRFGRRHAPMLRYRPPXXXXXXXXXXXXXXXXXPLSGMGQRGRKKKQRRGSSETGPQTGLQTVDGDGADYPAAXXXXXXXXXXXNAREGGVAARGCGGEGDGXXXXXXXXKEAVVVNGRYGPVPLDDGEXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLAEGSAAAGSGSNGDSTSTAD-----ISATADASTXXXXXXDGNMNGSPQNPVGGCNDDGGGDGANVAAIEAPA----ATAAAAEPAELLAGKKHFVVVSDVXXXXXXXEQTAVSAAATTSKSTAAGPXXXXXXXXXXXXXXXXXEPEHEMPHSAAVSQIXXXXXXXXXXXXXXXXEQPPTAVP---------------------------------YSLPTHAQAERERELASLVADTWSLADTFSASDAIGGVSLGRGLDGAGPPPAQGGDHFLTIAGPPWPKQDARVVHG 1210          
BLAST of mRNA_L-elsbetiae_contig9527.18508.1 vs. uniprot
Match: D7FH97_ECTSI (Similar to chromosome fragility associated gene 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH97_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 4.530e-30
Identity = 226/588 (38.44%), Postives = 252/588 (42.86%), Query Frame = 0
Query:    1 QLEACLTAVAAAEELEVSLPALRALAQFHMGDLRACLFTLQVCKGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------RAXXXXXXXXXXXXXXXXXXXXXXPVLAAASPSXXXXXSACCRHLADHVESCDAAAHTLAFDTFFPALAAEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------DGEGGCWKPPFSGRWPQVWAVSPSFVHAAAERPPAAGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGLGEMQGXXXXXXXXXXEHRVLITGRNFAHP-AGGPADSPVAGATGDGGVDIAGRRRGAAGDGAPGXXXXXXXXXXXXXXXXXXXXXXXXXXQQTQDGDGDGGG-SRRCPVRQVLVRFGRDL-VPGRVVSDTLVEAFAPARTEPGFVEVAVVVAGRGRXXXXXXXXXXXXXXXXGGLASDAPVST-ACSEEEGWWFGRRHCPLLRY 509
            +LEACLTAVAAAE L+VSL ALRALAQ+HMGDLRACLFTLQ CKGRR           XXXXXX                             XXXX                                            R+  XXXXXXXXXXXXXXXXXXXX         XXX  ++C  HLA HVES  AA+H LAFDTF PALAAEQA                                                                                     G  G W+ PF  RWP+VWAVSP+FVH  A       P                  XXXXXXXXXXXXXXXXXXXXXXXXXXX                   HRVLITGRNFAHP A   A S V G+  +GG            D   G                          +     D  GGG +RR   R+VLVRFGRD+ VPG+V+SDTLVEAFAPAR+E GFV+VAVVV                     G LASD+ ++T A + + GW FGRRH P+LRY
Sbjct: 1080 ELEACLTAVAAAERLDVSLGALRALAQYHMGDLRACLFTLQACKGRRRQANQQAMLSAXXXXXXGGDCSVIDITEPTPPSPRQGAVSTPTATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRSENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIASCRLHLAHHVESDYAASHALAFDTFLPALAAEQAFAAATPAMKEASSVPPETVGTAPHPAAAQRQGMATEACLAPGAGTAARGRTAIAATKGQGAMVGATTATTAAEESVVASLGGGKSGGDGRWEVPFFRRWPEVWAVSPTFVHTTAVEAVTVHPLFDRKGPAGAAVSGKGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------CRDGSSSKGHRVLITGRNFAHPVAADVAASAVLGS--EGGXXXXXXXXXXXXDALSGEASGRGELEQAGGKTGEK--------EDHLANDAAGGGETRRSKTRRVLVRFGRDVAVPGKVLSDTLVEAFAPARSEIGFVDVAVVVVAES-------------GAAGGDLASDSVIATTAAAGQHGWRFGRRHAPMLRY 1635          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9527.18508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG45_9PHAE7.330e-4441.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH97_ECTSI4.530e-3038.44Similar to chromosome fragility associated gene 1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.60coord: 1..65
e-value: 9.2E-6
score: 27.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9527contigL-elsbetiae_contig9527:1098..4739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9527.18508.1mRNA_L-elsbetiae_contig9527.18508.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9527 1098..4739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9527.18508.1 ID=prot_L-elsbetiae_contig9527.18508.1|Name=mRNA_L-elsbetiae_contig9527.18508.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=983bp
QLEACLTAVAAAEELEVSLPALRALAQFHMGDLRACLFTLQVCKGRRRQQ
QQQQQQQESAVIDMTKASASQPPAHQEPGTNTASSSNRRSSNGRRSSRAK
SKTAASAAAAAAAARPEEQEEPVLAAASPSPSPSPSACCRHLADHVESCD
AAAHTLAFDTFFPALAAEQAAAAARVVSVGGPPKLIAPGGGGGEEEKMGD
TARGAGGGGGGGSAVVAQTGGGGDGEGGCWKPPFSGRWPQVWAVSPSFVH
AAAERPPAAGPAGAAGAAGAALSVPGGGGNGGASAGGASGGAGSGASPPV
PGAGGATGLGEMQGGGGGGGGGGGEHRVLITGRNFAHPAGGPADSPVAGA
TGDGGVDIAGRRRGAAGDGAPGAEEAAGAQGARGARPAGAAAEGGRGGQQ
TQDGDGDGGGSRRCPVRQVLVRFGRDLVPGRVVSDTLVEAFAPARTEPGF
VEVAVVVAGRGRGGGGGGSGGSGGGGCGGGLASDAPVSTACSEEEGWWFG
RRHCPLLRYRPPPPPFPPIGGKKSGTSPGDCSGGGGGGGKRGRKKKKRKG
GFAALKGGAEDEAAAAVKEEGGAVPGAGAGESSASDGMGVAVVVNGRYGP
VSSEDDEEEEGEGEEEEEEEEEDLEDEDGQPKRPSSSCTGPSGGGGGSAS
NKRRRQIIEEDDEDGDGDNDDDGDGGCDQAAAAAAAAAAARLVAAEASSG
IGESGDSRGTRKDSPEMLQATSAPAVCEAEPMAGGVEAVPDAKPTGAADG
PCGDGVGVAAAAASAPGQETPPAGAEKAAAPTGAAAPTATATGLSATATG
LSATATGLSATATGLSAGLSATATGLSVGLSAAATGLSVGLSAAAAAAAA
ITPPAPAPAPASATTTTPPPALPASAPPAPPAPPAPPTPAPVTATPITDA
PVTAAPYRPPTPAQAEWERGLASLLADTCSLADAFSAADAIGGVSLGRGL
AGAGPPPADGGDHFLTVAGPPWAGQDVRVIQG*
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