prot_L-elsbetiae_contig951.18493.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig951.18493.1
Unique Nameprot_L-elsbetiae_contig951.18493.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length227
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig951.18493.1 vs. uniprot
Match: A0A6H5KKS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS0_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 3.460e-135
Identity = 187/227 (82.38%), Postives = 208/227 (91.63%), Query Frame = 0 
Query:    1 MYATSLPPRPNPHARIAENYAPRFSPDELPLLPVNWIPSWRTPPSKIWGD-GGVKRSDTGTTTAASSYASDAAAATNRPQTTGSIRFVRDSASRKVWGSLRENCTGRLHSVPTHNISDRSIDSGLIPRHLLDGSVPPPVGKRASSLDYFPPCERPSTVPAIHMGHQFRLLRETPTKRLDAYKRGAVLRDGPVRIVRHTSKDRTYMKKSEHRNPRGISRNVLGGFCTS 226
            MYATSLPPRPNPHAR AENYAPRFSPDELPLLPVNW+PSWR+PPSKIW D  GVKR + G TTAA+ Y S++AAA  RP+TTGSI FVRDS++R++WG+LR+NCTGRLH+V THNISDRSIDSGLIP HLLDGSVPPP GKRA+SLDYFPPC RP+TVPAI MGHQ+RL+R+TP KRL+AYKRGAVLRDGPVRIVRHTSKDRT+MKKS HRNPRGISRNVLGGFCTS
Sbjct:    1 MYATSLPPRPNPHARTAENYAPRFSPDELPLLPVNWVPSWRSPPSKIWEDPAGVKRGENGATTAATCYVSESAAAA-RPRTTGSIGFVRDSSAREMWGTLRDNCTGRLHAVQTHNISDRSIDSGLIPPHLLDGSVPPPQGKRATSLDYFPPCVRPATVPAIRMGHQYRLIRDTPAKRLEAYKRGAVLRDGPVRIVRHTSKDRTFMKKSAHRNPRGISRNVLGGFCTS 226
[Close]
BLAST of mRNA_L-elsbetiae_contig951.18493.1 vs. uniprot
Match: D8LIB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB8_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 3.720e-61
Identity = 101/147 (68.71%), Postives = 108/147 (73.47%), Query Frame = 0 
Query:  112 THNISDRSIDSGLIPRHLLDGSVPPPVGKRASSLDYFPPCERPSTVPAIHMGHQFRLLRETPTKRLDAYKRGAVLRDGPVRIVR--------------------------------HTSKDRTYMKKSEHRNPRGISRNVLGGFCTS 226
            THNISDRSIDSGLIP HLLDGSVPPP GKRA+SLDYFPPC RP+TVPAI MGHQ+RL+R+TP KRL+AYKRGAVLRDGPVRIV                                 HTSKDRT+MKKS HRNPRGISRNVLGGFCTS
Sbjct:    4 THNISDRSIDSGLIPPHLLDGSVPPPQGKRATSLDYFPPCVRPATVPAIRMGHQYRLIRDTPAKRLEAYKRGAVLRDGPVRIVSADYHWLHAICGQQPRPLPTGNDQQSESGSIPLHTSKDRTFMKKSAHRNPRGISRNVLGGFCTS 150
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig951.18493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKS0_9PHAE3.460e-13582.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIB8_ECTSI3.720e-6168.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig951contigL-elsbetiae_contig951:13145..18053 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig951.18493.1mRNA_L-elsbetiae_contig951.18493.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig951 13114..18856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig951.18493.1 ID=prot_L-elsbetiae_contig951.18493.1|Name=mRNA_L-elsbetiae_contig951.18493.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=227bp
MYATSLPPRPNPHARIAENYAPRFSPDELPLLPVNWIPSWRTPPSKIWGD
GGVKRSDTGTTTAASSYASDAAAATNRPQTTGSIRFVRDSASRKVWGSLR
ENCTGRLHSVPTHNISDRSIDSGLIPRHLLDGSVPPPVGKRASSLDYFPP
CERPSTVPAIHMGHQFRLLRETPTKRLDAYKRGAVLRDGPVRIVRHTSKD
RTYMKKSEHRNPRGISRNVLGGFCTS*
back to top