prot_L-elsbetiae_contig9497.18478.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9497.18478.1
Unique Nameprot_L-elsbetiae_contig9497.18478.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length604
Homology
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Match: A0A6H5JGI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI3_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.710e-47
Identity = 106/156 (67.95%), Postives = 120/156 (76.92%), Query Frame = 0
Query:  432 SGQGLVVTRGVSIKADVHVPFATVAVTRGGELCGRVVAREFLLEDGGRLEGEVECDFAVIKGLMAGLLVSKEMATVGPSARVNGDIIYNVLELDRGAVIRGRLFSLR-------STATPVFEEGRPPAAAAGVEVDKQARLERELRAAMVEDMAAP 580
            S QGLVV+RGVS+ ADVHVPFATVAVTRGG+LCGR+VA+EFLLEDGGR+EGEVEC FAVI+G +   LVSKEMATVGPSA +NGD+IYNVLELDRGA+I GRLFS+R       S++ PV   G         E  KQ RLERELR AM ED A P
Sbjct: 1996 SEQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDGGRVEGEVECHFAVIEGSLEASLVSKEMATVGPSASINGDVIYNVLELDRGAIITGRLFSIRPSTADASSSSCPVPWGGLVSRPWQQEEEAKQLRLERELRLAMAEDGAGP 2151          
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Match: D8LJC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC8_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.930e-44
Identity = 89/109 (81.65%), Postives = 101/109 (92.66%), Query Frame = 0
Query:  432 SGQGLVVTRGVSIKADVHVPFATVAVTRGGELCGRVVAREFLLEDGGRLEGEVECDFAVIKGLMAGLLVSKEMATVGPSARVNGDIIYNVLELDRGAVIRGRLFSLRST 540
            S QGLVV+RGVS+ ADVHVPFATVAVTRGG+LCGR+VA+EFLLEDGGR+EGEVECDFAVI+G +   LVSKEMATVGPSA +NGD+IYNVLELDRGA+I GRLFS+RST
Sbjct: 1459 SDQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDGGRVEGEVECDFAVIEGSLEASLVSKEMATVGPSASINGDVIYNVLELDRGAIITGRLFSIRST 1567          
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Match: A0A4Q1CWK6_9GAMM (Polymer-forming cytoskeletal protein n=2 Tax=Stenotrophomonas TaxID=40323 RepID=A0A4Q1CWK6_9GAMM)

HSP 1 Score: 58.2 bits (139), Expect = 2.220e-6
Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = 0
Query:  461 GELCGRVVARE------FLLEDGGRLEGEVECDFAVIKGLMAGLLVSKEMATVGPSARVNGDIIYNVLELDRGAVIRGRLF--SLRSTATPVFEEGRP 550
            G + G+V+A E        L + G +EGE+     VI G + G + + E   + PSARVNG++ Y V+E++ GA + GRL   S    A P  E G P
Sbjct:   39 GRIHGKVIAAEGASTATLTLAEHGVIEGEIRAQVVVISGRLEGDVHATEKVELTPSARVNGNVHYEVVEMNAGAQLNGRLIHASAPLAALPAPESGDP 136          
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Match: A0A2E0GPM3_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E0GPM3_9GAMM)

HSP 1 Score: 57.0 bits (136), Expect = 4.060e-6
Identity = 30/102 (29.41%), Postives = 55/102 (53.92%), Query Frame = 0
Query:  433 GQGLVVTRGVSIKADVHVPFATVAVTRGGELCGRVVAREFLLEDGGRLEGEVECDFAVIKGLMAGLLVSKEMATVGPSARVNGDIIYNVLELDRGAVIRGRL 534
            G+ LV+T  + I   +H+     ++ RG  +C R V  +  L    ++ G V      I G + G +   ++  +G +A+++GDI+YN ++++ GAVI G L
Sbjct:   10 GKSLVITGDLFISGAIHID----SIVRGNVICKRDVKAKIFLGKDSKIYGNVYGPLISIDGYVDGNVYCYDLLQIGSAAKISGDILYNKVDMEAGAVIHGNL 107          
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Match: A0A0D0HYU2_STEMA (Cell shape determination protein CcmA n=13 Tax=Stenotrophomonas TaxID=40323 RepID=A0A0D0HYU2_STEMA)

HSP 1 Score: 57.4 bits (137), Expect = 4.280e-6
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 0
Query:  461 GELCGRVVARE------FLLEDGGRLEGEVECDFAVIKGLMAGLLVSKEMATVGPSARVNGDIIYNVLELDRGAVIRGRL 534
            G + G+V+A+E        L D G +EGE+     VI G M G + + E   + PSARVNG++ Y V+E+  GA + GRL
Sbjct:   39 GRIHGKVIAQEGASNANITLADNGVVEGEIRAQVVVISGRMDGDVHASERVELTPSARVNGNVHYQVVEMAAGAQLNGRL 118          
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Match: A0A0R0CL58_9GAMM (Cell shape determination protein CcmA n=1 Tax=Stenotrophomonas humi TaxID=405444 RepID=A0A0R0CL58_9GAMM)

HSP 1 Score: 56.6 bits (135), Expect = 6.300e-6
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 0
Query:  461 GELCGRVVARE-----FLLEDGGRLEGEVECDFAVIKGLMAGLLVSKEMATVGPSARVNGDIIYNVLELDRGAVIRGRL 534
            G + G+VVA E       L + G +EGE+     V+ G M G + + E   + PSARVNG++ Y V+E++ GA + GRL
Sbjct:   38 GRILGKVVAAEGSEAMLTLAEQGHIEGEIRAAVVVLSGRMDGDVHATERVELTPSARVNGNVHYQVVEMNAGAQLNGRL 116          
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Match: UPI0013EA2B5F (polymer-forming cytoskeletal protein n=1 Tax=Thioalkalivibrio sp. XN8 TaxID=2712863 RepID=UPI0013EA2B5F)

HSP 1 Score: 56.2 bits (134), Expect = 7.210e-6
Identity = 31/102 (30.39%), Postives = 54/102 (52.94%), Query Frame = 0
Query:  433 GQGLVVTRGVSIKADVHVPFATVAVTRGGELCGRVVAREFLLEDGGRLEGEVECDFAVIKGLMAGLLVSKEMATVGPSARVNGDIIYNVLELDRGAVIRGRL 534
            G G  V+  +  +  VH+  A       G++ G        +   G + G V+ D  V+ G + G ++++E   +GP+ARV+G+++Y VLE+  GA + GRL
Sbjct:   17 GGGTTVSGNLEFQGRVHLDGAI-----EGDVTGEAGRSVLAIGTDGVIAGTVQVDTLVLSGTVRGDVIARERVELGPTARVDGNVMYQVLEMSAGACVNGRL 113          
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Match: B8GLD2_THISH (Integral membrane protein CcmA involved in cell shape determination-like protein n=3 Tax=Thioalkalivibrio TaxID=106633 RepID=B8GLD2_THISH)

HSP 1 Score: 55.8 bits (133), Expect = 1.350e-5
Identity = 29/78 (37.18%), Postives = 44/78 (56.41%), Query Frame = 0
Query:  473 LLEDGGRLEGEVECDFAVIKGLMAGLLVSKEMATVGPSARVNGDIIYNVLELDRGAVIRGRLFSLRSTATPVFEEGRP 550
            +L +GGR+EGEV     VI G + G + + E   + P AR++G + YN++E+  GA + G L   RS   P  E  +P
Sbjct:   55 ILNEGGRIEGEVNVPRVVINGTVEGDVHASERVELAPKARISGSVYYNLIEMAMGAEVNGNLIR-RSNDKPRLEYLKP 131          
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Match: A0A3R8UAF0_9GAMM (Polymer-forming cytoskeletal family protein n=1 Tax=Stenotrophomonas sp. 278 TaxID=2479851 RepID=A0A3R8UAF0_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 1.990e-5
Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query:  461 GELCGRVVARE------FLLEDGGRLEGEVECDFAVIKGLMAGLLVSKEMATVGPSARVNGDIIYNVLELDRGAVIRGRL 534
            G + G+V+A E        L + G +EGE+     V+ G + G + + E   + PSARVNG+I Y V+E++ GA + GRL
Sbjct:   39 GTILGKVIASEGASTATLTLAEQGSIEGEIRAQVVVLSGRLEGDVHASERVELTPSARVNGNIHYQVVEMNAGAQLTGRL 118          
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Match: A0A661GBC4_9GAMM (Cell shape determination protein CcmA n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GBC4_9GAMM)

HSP 1 Score: 54.7 bits (130), Expect = 2.760e-5
Identity = 25/73 (34.25%), Postives = 43/73 (58.90%), Query Frame = 0
Query:  474 LEDGGRLEGEVECDFAVIKGLMAGLLVSKEMATVGPSARVNGDIIYNVLELDRGAVIRGRLFSLRSTATPVFE 546
            + +GG +EG V   + V+ G++ G +V  +   +GP+ARV G++ YN++E+  GA I G+L        P+ E
Sbjct:   54 ISEGGSVEGGVSVPYVVLNGIVRGDVVVSQRVELGPTARVIGNVYYNLIEMSIGAEINGKLVHQPEGQVPLLE 126          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9497.18478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JGI3_9PHAE1.710e-4767.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJC8_ECTSI1.930e-4481.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4Q1CWK6_9GAMM2.220e-636.73Polymer-forming cytoskeletal protein n=2 Tax=Steno... [more]
A0A2E0GPM3_9GAMM4.060e-629.41Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A0D0HYU2_STEMA4.280e-640.00Cell shape determination protein CcmA n=13 Tax=Ste... [more]
A0A0R0CL58_9GAMM6.300e-639.24Cell shape determination protein CcmA n=1 Tax=Sten... [more]
UPI0013EA2B5F7.210e-630.39polymer-forming cytoskeletal protein n=1 Tax=Thioa... [more]
B8GLD2_THISH1.350e-537.18Integral membrane protein CcmA involved in cell sh... [more]
A0A3R8UAF0_9GAMM1.990e-537.50Polymer-forming cytoskeletal family protein n=1 Ta... [more]
A0A661GBC4_9GAMM2.760e-534.25Cell shape determination protein CcmA n=2 Tax=Gamm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 437..534
e-value: 1.1E-11
score: 44.9
NoneNo IPR availablePANTHERPTHR23261GROUNDHOG-RELATEDcoord: 13..338
NoneNo IPR availablePANTHERPTHR23261:SF22GROUND-LIKE (GRD RELATED)coord: 13..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9497contigL-elsbetiae_contig9497:935..7485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9497.18478.1mRNA_L-elsbetiae_contig9497.18478.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9497 935..7485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9497.18478.1 ID=prot_L-elsbetiae_contig9497.18478.1|Name=mRNA_L-elsbetiae_contig9497.18478.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=604bp
RPSTTREPWEAFTFSDGVFQRASARPAEADSGGDGDGSGGGSGSGSGLNE
SGLTWAGTGEVVLPPPGICLVDQGKELRARRKYELERADTDVGIDTSAAA
AAADSKMKKRSPTSPSALVVPAEGMKITLPNGDSRSGSDRKSEQFPEGGV
TGQRQDGGQQEEKTGRALRSPLSAFLRLKKTAASLAAPAHAPAPHSARRS
SSTGGPRGTVDDPSDVNVNATTVQPREKESKGAAATASPRAAVAAARAAS
VAGGGDDGGDGGGGGGDDRVGVSVGGGGDVFGGSSLEGGDRAAGQASRSR
DEDEEGKEEGEQQFQERLQEENGAGAGARARLSASPNTSGDSGNNNDGDG
DGKERGEGAEVSLRSAAGNSAASAKESPSSDLPKSTNGSALGLGESECEG
GDAVLGCRAAGAAGVAGVGSAAGGPSGYHSASGQGLVVTRGVSIKADVHV
PFATVAVTRGGELCGRVVAREFLLEDGGRLEGEVECDFAVIKGLMAGLLV
SKEMATVGPSARVNGDIIYNVLELDRGAVIRGRLFSLRSTATPVFEEGRP
PAAAAGVEVDKQARLERELRAAMVEDMAAPVPVPVPAIGRVFPGPFGGGQ
GNGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B