prot_L-elsbetiae_contig9477.18461.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9477.18461.1
Unique Nameprot_L-elsbetiae_contig9477.18461.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length81
Homology
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BLAST of mRNA_L-elsbetiae_contig9477.18461.1 vs. uniprot
Match: D7FUL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL6_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 3.040e-25
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 0 
Query:    1 FILTIFGTCVYFYNGIVILFDELSDSKVSRRLVIIGWCSRYMHVVADTAIILVAFLAMDKKEREKKAGVRHSSGGSVGD 79
            FILTIFGT VY YNGIV++FDE SD K+S+RLVIIGWCSRY+HV+ADT II  AF A++KKE       R S+ G  GD
Sbjct:  199 FILTIFGTFVYLYNGIVLMFDEFSDFKISKRLVIIGWCSRYVHVIADTGIIFGAFYALEKKEXXXXLLRRESNSGGTGD 277
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BLAST of mRNA_L-elsbetiae_contig9477.18461.1 vs. uniprot
Match: A0A6H5JRD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD9_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 5.730e-23
Identity = 46/65 (70.77%), Postives = 54/65 (83.08%), Query Frame = 0 
Query:    1 FILTIFGTCVYFYNGIVILFDELSDSKVSRRLVIIGWCSRYMHVVADTAIILVAFLAMDKKEREK 65
            FILTIFGT VY YNGIV++FDE SD K+S RLVIIGWCSRY HV+ADT II  AF A++KKE ++
Sbjct:  199 FILTIFGTFVYLYNGIVLMFDEFSDFKISTRLVIIGWCSRYAHVIADTGIIFGAFYALEKKEEDE 263
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9477.18461.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUL6_ECTSI3.040e-2564.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRD9_9PHAE5.730e-2370.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availableTMHMMTMhelixcoord: 2..19
NoneNo IPR availableTMHMMTMhelixcoord: 34..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9477contigL-elsbetiae_contig9477:3113..5968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9477.18461.1mRNA_L-elsbetiae_contig9477.18461.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9477 3112..5968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9477.18461.1 ID=prot_L-elsbetiae_contig9477.18461.1|Name=mRNA_L-elsbetiae_contig9477.18461.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=81bp
FILTIFGTCVYFYNGIVILFDELSDSKVSRRLVIIGWCSRYMHVVADTAI
ILVAFLAMDKKEREKKAGVRHSSGGSVGDLP
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