prot_L-elsbetiae_contig9459.18447.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9459.18447.1
Unique Nameprot_L-elsbetiae_contig9459.18447.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length159
Homology
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BLAST of mRNA_L-elsbetiae_contig9459.18447.1 vs. uniprot
Match: D8LKH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH3_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.470e-46
Identity = 95/168 (56.55%), Postives = 116/168 (69.05%), Query Frame = 0 
Query:    5 QGDFEAVKRTLLEKEDALTRGTGSFLMADTIERFRGCSTRRPATNETSKRREGLGQRSRARRGTAT-DSDPFQYGNCNADRLLREGARRQELLVHAKTRSNIFCRRKGYEPGDFLEHRA--GGGGFRSSTDR----------GRGENSDRSAAAAAIAAESRRKVHRH 159
            +G+FEA KRTLLEKEDAL +GTGSFLMADTI+RFR  S  RP T++ S RR    +R+ A+R     +SDPFQ G  N+++L RE  RRQ+LLVHAK R+N+FCRRKGYEPGDFL+HR+  GG  F S              G  +   RSA AAA+AAESRRK H+H
Sbjct:   13 KGNFEAEKRTLLEKEDALRKGTGSFLMADTIQRFRSSSEGRPPTSDLSARRGSQRRRAAAKRAMVPIESDPFQCGGYNSEKLKREETRRQDLLVHAKGRNNMFCRRKGYEPGDFLKHRSPPGGQDFNSGAASCRRGSVGGAIGARKGGARSAEAAAMAAESRRKAHQH 180
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9459.18447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKH3_ECTSI2.470e-4656.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9459contigL-elsbetiae_contig9459:2430..4960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9459.18447.1mRNA_L-elsbetiae_contig9459.18447.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9459 2430..4960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9459.18447.1 ID=prot_L-elsbetiae_contig9459.18447.1|Name=mRNA_L-elsbetiae_contig9459.18447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp
MERHQGDFEAVKRTLLEKEDALTRGTGSFLMADTIERFRGCSTRRPATNE
TSKRREGLGQRSRARRGTATDSDPFQYGNCNADRLLREGARRQELLVHAK
TRSNIFCRRKGYEPGDFLEHRAGGGGFRSSTDRGRGENSDRSAAAAAIAA
ESRRKVHRH
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