prot_L-elsbetiae_contig945.18441.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig945.18441.1
Unique Nameprot_L-elsbetiae_contig945.18441.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length237
Homology
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BLAST of mRNA_L-elsbetiae_contig945.18441.1 vs. uniprot
Match: D7G552_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G552_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 4.410e-9
Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0 
Query:  166 AMKKNGDEFMARVSSAQGGKPLDEETCRVLREMWARREVQAGVPNFGAGGKEGLDNGLFYVTLRRENAP 234
            A ++  D+  AR+   Q G+ L +ETC +L +MW + E++ G  +FG G + G+DNGLFY  L R+NAP
Sbjct:   15 ANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGELKDGTDSFGDGSR-GIDNGLFYGFLSRDNAP 82
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig945.18441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G552_ECTSI4.410e-943.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig945contigL-elsbetiae_contig945:20046..21332 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig945.18441.1mRNA_L-elsbetiae_contig945.18441.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig945 20046..21353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig945.18441.1 ID=prot_L-elsbetiae_contig945.18441.1|Name=mRNA_L-elsbetiae_contig945.18441.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
MGSRVPENGGEWSAGGKRARHEITISANSSEVPSAGQGPAVSCHWHTALP
DPAAVGLAAAPKALLPSPLGIPPLLPGTVRMGLGTLQKGLVQPGLQPLGP
LAFSFLAGLCPPALLPGLLPPARQPASEATGSGGRADLRSEERKKKMREA
AQRQTLRRQKERKEKAMKKNGDEFMARVSSAQGGKPLDEETCRVLREMWA
RREVQAGVPNFGAGGKEGLDNGLFYVTLRRENAPAAG
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