prot_L-elsbetiae_contig9421.18416.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9421.18416.1
Unique Nameprot_L-elsbetiae_contig9421.18416.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length153
Homology
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BLAST of mRNA_L-elsbetiae_contig9421.18416.1 vs. uniprot
Match: A0A6H5LBA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBA6_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.790e-17
Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = 0 
Query:    7 TPLVGECGVLSGCTGSKPLTVITEAELDDLGSLHDVNLFVRLSALR-RGLWCRECHQSFIDALSTGAQQXXXXXXXXXXXXXXEQQHQETGRKRDFAEISEAATEHQPPLQQPQGQTT--LGHQL 128
            TP VG CG+++GC G K +T IT+ +L+ LGSL DV+LFV+LSALR  G+WC +CHQ   +A S   QQ              +Q   E+GRKRD AE          PL  P G T   +GH L
Sbjct:    4 TPAVGPCGLVAGCAGDKQVTFITQEQLNGLGSLRDVDLFVKLSALRVGGIWCEDCHQLLFNAASGSKQQ--------------QQLQPESGRKRDHAETMTHERPQPQPLVAPPGDTREPVGHGL 114
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9421.18416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBA6_9PHAE3.790e-1744.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9421contigL-elsbetiae_contig9421:2002..2460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9421.18416.1mRNA_L-elsbetiae_contig9421.18416.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9421 2002..7088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9421.18416.1 ID=prot_L-elsbetiae_contig9421.18416.1|Name=mRNA_L-elsbetiae_contig9421.18416.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp
MAAAHTTPLVGECGVLSGCTGSKPLTVITEAELDDLGSLHDVNLFVRLSA
LRRGLWCRECHQSFIDALSTGAQQPPPPPLPPPPPPLSEQQHQETGRKRD
FAEISEAATEHQPPLQQPQGQTTLGHQLHQEQQQHAERQQPLDAAPPPAG
TEQ
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