prot_L-elsbetiae_contig9420.18415.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9420.18415.1
Unique Nameprot_L-elsbetiae_contig9420.18415.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length90
Homology
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BLAST of mRNA_L-elsbetiae_contig9420.18415.1 vs. uniprot
Match: A0A6H5J974_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J974_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.160e-42
Identity = 77/89 (86.52%), Postives = 84/89 (94.38%), Query Frame = 0 
Query:    1 MITTTDSLAQTQEALLATSRGLLEELRLHDTTRQADAIDGRADKIRETCAALERVSDRLSALRRRAEVLEAELEADGCVAGDGVSELRL 89
            MI TTDSLAQTQ+ LLATSRGLLEELRLHDT RQADAI+ RADKIR+TCAALERV+DRL+ALRRRA+VLEAELEADGCVAGDGVS+L L
Sbjct:   23 MIATTDSLAQTQDDLLATSRGLLEELRLHDTARQADAIETRADKIRQTCAALERVTDRLAALRRRAQVLEAELEADGCVAGDGVSDLCL 111
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BLAST of mRNA_L-elsbetiae_contig9420.18415.1 vs. uniprot
Match: D7FMC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC6_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 5.680e-42
Identity = 76/89 (85.39%), Postives = 83/89 (93.26%), Query Frame = 0 
Query:    1 MITTTDSLAQTQEALLATSRGLLEELRLHDTTRQADAIDGRADKIRETCAALERVSDRLSALRRRAEVLEAELEADGCVAGDGVSELRL 89
            MI TTD LA+TQ+ LLATSRGLLEELRLHDT RQADAI+ RADKIR+TCAALERV+DRL+ALRRRA+VLEAELEADGCVAGDGVSEL L
Sbjct:   29 MIATTDRLARTQDDLLATSRGLLEELRLHDTARQADAIEARADKIRQTCAALERVTDRLAALRRRAQVLEAELEADGCVAGDGVSELCL 117
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9420.18415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J974_9PHAE1.160e-4286.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMC6_ECTSI5.680e-4285.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9420contigL-elsbetiae_contig9420:4680..6849 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9420.18415.1mRNA_L-elsbetiae_contig9420.18415.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9420 3420..6888 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9420.18415.1 ID=prot_L-elsbetiae_contig9420.18415.1|Name=mRNA_L-elsbetiae_contig9420.18415.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=90bp
MITTTDSLAQTQEALLATSRGLLEELRLHDTTRQADAIDGRADKIRETCA
ALERVSDRLSALRRRAEVLEAELEADGCVAGDGVSELRL*
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