prot_L-elsbetiae_contig939.18383.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig939.18383.1
Unique Nameprot_L-elsbetiae_contig939.18383.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length149
Homology
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BLAST of mRNA_L-elsbetiae_contig939.18383.1 vs. uniprot
Match: D7G0F5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0F5_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 4.200e-51
Identity = 95/128 (74.22%), Postives = 103/128 (80.47%), Query Frame = 0 
Query:   28 AATVLPSILDALTCLDNTARNGAEQAFNGLKDGQPEDLVYGLLEGIGSKHLAPHVRGLAAVLLRRALLVDEPSLWDCLPPAADMGQGHRGIEGRGG-------QRELQACLLQILSDEGDPSVRRKVG 148
            AA ++ S+L ALT  DN+ARN AEQAFN LK  QPE L+YGLLEGIGSKHL PHVRGLAAVLLRRALLV+EP+LWDCLP A+DMG GH   EG GG       QRELQACLLQILSDEGD SVRRKVG
Sbjct:   47 AAPIVVSLLHALTSADNSARNRAEQAFNELKQSQPEALLYGLLEGIGSKHLPPHVRGLAAVLLRRALLVEEPTLWDCLPAASDMGSGHGASEGGGGAEVGKMGQRELQACLLQILSDEGDASVRRKVG 174
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BLAST of mRNA_L-elsbetiae_contig939.18383.1 vs. uniprot
Match: A0A1V9YJA6_9STRA (Importin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJA6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.310e-8
Identity = 46/113 (40.71%), Postives = 61/113 (53.98%), Query Frame = 0 
Query:   35 ILDALTCLDNTARNGAEQAFNGLKDGQPEDLVYGLLEGIGSKHLAPHVRGLAAVLLRRALLVDEPSLWDCLPPAADMGQGHRGIEGRGGQRELQACLLQILSDEGDPSVRRKV 147
            +L +L   DN  RN AE  F G+K      L++ LL+ I S   +  +RGLAAVLLRR LL DE SLW C    A              Q  ++  LLQ+L+ E +PS+RRK+
Sbjct:    9 MLWSLMSPDNAERNQAESMFEGMKADSDGTLLH-LLQVIRSP-ASDDLRGLAAVLLRRVLLRDEVSLW-CNATNAT-------------QHSVKNDLLQVLTHEANPSIRRKL 105
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BLAST of mRNA_L-elsbetiae_contig939.18383.1 vs. uniprot
Match: A0A3M7L2Y6_AUXPR (TOG domain-containing protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7L2Y6_AUXPR)

HSP 1 Score: 58.5 bits (140), Expect = 3.900e-7
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 0 
Query:   34 SILDALTCLDNTARNGAEQAFNGLKDGQPEDLVYGLLEGIGSKHLAPHVRGLAAVLLRRALLVDEPSLWDCLPPAADM----GQGHRGIEGRGGQRELQACLLQILSDEGD 140
            ++L  L   +N  R+ AEQAF  LK   P+  V GL++G+ S    P  R L AVLLR+ L+ DEPSLW  L PA+ +     +   G+    G  EL   + Q +    D
Sbjct:   37 ALLQGLLSSENEVRSQAEQAFTELKK-YPDTCVPGLVQGLRSNP-DPASRSLCAVLLRKVLVRDEPSLWTGLSPASKVCDLVSELAAGVLEESGWPELLPFMFQCIQSGED 145
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig939.18383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0F5_ECTSI4.200e-5174.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V9YJA6_9STRA3.310e-840.71Importin-like protein n=1 Tax=Achlya hypogyna TaxI... [more]
A0A3M7L2Y6_AUXPR3.900e-736.94TOG domain-containing protein n=3 Tax=Auxenochlore... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 22..148
e-value: 3.9E-11
score: 43.7
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 36..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig939contigL-elsbetiae_contig939:3010..7393 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig939.18383.1mRNA_L-elsbetiae_contig939.18383.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig939 3010..7424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig939.18383.1 ID=prot_L-elsbetiae_contig939.18383.1|Name=mRNA_L-elsbetiae_contig939.18383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp
MTSPSPMGDASDQEPNGQNQEVAKQATAATVLPSILDALTCLDNTARNGA
EQAFNGLKDGQPEDLVYGLLEGIGSKHLAPHVRGLAAVLLRRALLVDEPS
LWDCLPPAADMGQGHRGIEGRGGQRELQACLLQILSDEGDPSVRRKVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold