prot_L-elsbetiae_contig9385.18381.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9385.18381.1
Unique Nameprot_L-elsbetiae_contig9385.18381.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length259
Homology
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BLAST of mRNA_L-elsbetiae_contig9385.18381.1 vs. uniprot
Match: D8LHQ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHQ3_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 1.400e-83
Identity = 151/258 (58.53%), Postives = 178/258 (68.99%), Query Frame = 0 
Query:    1 MVIMRNESLFPGMVGISLPLKGNLWVREDGTFNLSGFFRRQIPKFKLGMLMAARTDMAQNLDVFHAVYRPVVETAAARQQFQVIRTVLEAGLGYYREDCPARRDLLELRSRVVKMRARSSSSSSARDGSDAAQPAAATSPSKVAAADELTTEDLMETRRRISDAKLEDKDGTPRPSLSSGGSDDVAGGPADPDADRSNRIDSXXXXXXXXXXXXXXGQERKLKIAQQVVGGETPKQKGPFRLWKSKTGQESYDKTAPS 258
            ++I+RNE + PGMVGISLPLKGNLWVREDGT NLSGFFRRQIPKF+LG+LMAA+ DM++ LD +HAVYRPVVE AA RQQFQVIRT+LE GLGYY++D P RRDLLELR+RV K+R+RSS+S                      +   ++TE++METRRRISD+KLE KDG          S   A G    DA RS R+ S              G +RKLKIAQQVVGG+ PKQ GPFRLWKSKTG+ SY K  PS
Sbjct:   91 LLILRNERILPGMVGISLPLKGNLWVREDGTCNLSGFFRRQIPKFELGLLMAAKEDMSKFLDCYHAVYRPVVEHAAQRQQFQVIRTLLETGLGYYKDDSPTRRDLLELRARVTKLRSRSSASXXXXXXXXXXXXXXXXX--XPTSGGNMSTEEVMETRRRISDSKLE-KDGAGXXXXEGTRSTSFASGGESDDASRSGRVGS--------------GPDRKLKIAQQVVGGDAPKQSGPFRLWKSKTGEASYSKEEPS 331
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9385.18381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHQ3_ECTSI1.400e-8358.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9385contigL-elsbetiae_contig9385:119..5189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9385.18381.1mRNA_L-elsbetiae_contig9385.18381.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9385 107..5415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9385.18381.1 ID=prot_L-elsbetiae_contig9385.18381.1|Name=mRNA_L-elsbetiae_contig9385.18381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=259bp
MVIMRNESLFPGMVGISLPLKGNLWVREDGTFNLSGFFRRQIPKFKLGML
MAARTDMAQNLDVFHAVYRPVVETAAARQQFQVIRTVLEAGLGYYREDCP
ARRDLLELRSRVVKMRARSSSSSSARDGSDAAQPAAATSPSKVAAADELT
TEDLMETRRRISDAKLEDKDGTPRPSLSSGGSDDVAGGPADPDADRSNRI
DSRSNRIDSRSSRTESGQERKLKIAQQVVGGETPKQKGPFRLWKSKTGQE
SYDKTAPS*
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