prot_L-elsbetiae_contig9309.18308.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9309.18308.1
Unique Nameprot_L-elsbetiae_contig9309.18308.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length102
Homology
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BLAST of mRNA_L-elsbetiae_contig9309.18308.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 3.710e-23
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0 
Query:   35 MKVTATFALASVLASSADASTFKVRVRNLTYLQPFSPPLIVAHTNDVALFKEAFPASEAIQIMAENGD 102
            +K TA FALASVL S A A+ FKVRVRNLTYLQPFSP L+VAHTNDVALFKE  PAS+AI++MAE+GD
Sbjct:    2 VKFTAGFALASVL-SLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGD 68
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BLAST of mRNA_L-elsbetiae_contig9309.18308.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.540e-21
Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 0 
Query:   38 TATFALASVL----ASSADAST--FKVRVRNLTYLQPFSPPLIVAHTNDVALFKEAFPASEAIQIMAENGD 102
            TA FA+AS++    AS  D +T  FKVRVRNLTYLQPFSPPLIVAHT DVALFKE FPA++AI++MAE+GD
Sbjct:    5 TAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGD 75
[Close]
BLAST of mRNA_L-elsbetiae_contig9309.18308.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 3.800e-16
Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 0 
Query:   51 ADASTFKVRVRNLTYLQPFSPPLIVAHTNDVALFKEAFPASEAIQIMAENGD 102
            A+A    VRVRNLTYLQPFSP  +VAHTNDV++F+E FPAS+A++IMAE+GD
Sbjct:    2 ANAGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGD 53
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9309.18308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4K4_ECTSI3.710e-2376.47Spondin domain-containing protein n=3 Tax=Ectocarp... [more]
D7FIE5_ECTSI2.540e-2170.42Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7G4K3_ECTSI3.800e-1669.23Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 49..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..102
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 37..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9309contigL-elsbetiae_contig9309:1132..1967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9309.18308.1mRNA_L-elsbetiae_contig9309.18308.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9309 1132..1968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9309.18308.1 ID=prot_L-elsbetiae_contig9309.18308.1|Name=mRNA_L-elsbetiae_contig9309.18308.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
KIKRCPRTRGHAPHNHHWHSLFQHLYPSTTLPNKMKVTATFALASVLASS
ADASTFKVRVRNLTYLQPFSPPLIVAHTNDVALFKEAFPASEAIQIMAEN
GD
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