prot_L-elsbetiae_contig9307.18306.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9307.18306.1
Unique Nameprot_L-elsbetiae_contig9307.18306.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length89
Homology
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BLAST of mRNA_L-elsbetiae_contig9307.18306.1 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 8.060e-36
Identity = 72/89 (80.90%), Postives = 79/89 (88.76%), Query Frame = 0 
Query:    1 EHQVGLLGAINPVASFFWTPVACAFADRHNVQQQVVYVALLLLAVTRPSVLFVSSFLAVAAVETSVSISGSPVGSLIDSAVRNAFGADG 89
            E  VGLLGAINPVASFFWTPVACAFADRHN+QQQVVYVA +L AVTRPSVL  SSFLAVAAVE SVS+S SPVGSL+D+A+R+A G DG
Sbjct:    7 ESIVGLLGAINPVASFFWTPVACAFADRHNIQQQVVYVASILYAVTRPSVLLASSFLAVAAVEISVSVSESPVGSLVDAAIRHASGGDG 95
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BLAST of mRNA_L-elsbetiae_contig9307.18306.1 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 7.240e-31
Identity = 65/89 (73.03%), Postives = 72/89 (80.90%), Query Frame = 0 
Query:    1 EHQVGLLGAINPVASFFWTPVACAFADRHNVQQQVVYVALLLLAVTRPSVLFVSSFLAVAAVETSVSISGSPVGSLIDSAVRNAFGADG 89
            EHQVG+LGAI PVASFF  PV CAFADRH++ QQVVY AL L  VTRPSVLF  +FLAVAAVE S S S SP+GSLIDS++R AFG DG
Sbjct:   38 EHQVGILGAIRPVASFFVNPVMCAFADRHSIHQQVVYTALFLYVVTRPSVLFAGTFLAVAAVEASCSFSTSPIGSLIDSSIRQAFGGDG 126
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BLAST of mRNA_L-elsbetiae_contig9307.18306.1 vs. uniprot
Match: D7G0X8_ECTSI (Probable maltose permease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X8_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.210e-19
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 0 
Query:    3 QVGLLGAINPVASFFWTPVACAFADRHNVQQQVVYVALLLLAVTRPSVLFVSSFLAVAAVETSVSISGSPVGSLIDSAVRNAFGADG 89
            +VGLL A+ P+A     P  CAF D+H VQQ  +YV LLL A+T  +VLF  SF A+AAVE S S+S SP+ SLID+AVRNAFG+ G
Sbjct:  161 EVGLLAAVRPIAVILAGPTICAFTDKHGVQQTALYVLLLLFAITGSTVLFAGSFFALAAVEISSSVSRSPIVSLIDAAVRNAFGSGG 247
[Close]
BLAST of mRNA_L-elsbetiae_contig9307.18306.1 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.630e-9
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0 
Query:    1 EHQVGLLGAINPVASFFWTPVACAFADRHNVQQQ 34
            EHQVG+LGAI PVASFF TPV CAFADRH++ QQ
Sbjct:   12 EHQVGILGAIRPVASFFVTPVMCAFADRHSIHQQ 45
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9307.18306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JEM5_9PHAE8.060e-3680.90MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5K6H4_9PHAE7.240e-3173.03MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
D7G0X8_ECTSI1.210e-1957.47Probable maltose permease n=1 Tax=Ectocarpus silic... [more]
D7G3W1_ECTSI1.630e-979.41MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 3..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9307contigL-elsbetiae_contig9307:472..1164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9307.18306.1mRNA_L-elsbetiae_contig9307.18306.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9307 471..1164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9307.18306.1 ID=prot_L-elsbetiae_contig9307.18306.1|Name=mRNA_L-elsbetiae_contig9307.18306.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
EHQVGLLGAINPVASFFWTPVACAFADRHNVQQQVVYVALLLLAVTRPSV
LFVSSFLAVAAVETSVSISGSPVGSLIDSAVRNAFGADG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf