prot_L-elsbetiae_contig92.18218.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig92.18218.1
Unique Nameprot_L-elsbetiae_contig92.18218.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Match: A0A6H5KCD4_9PHAE (tRNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD4_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 4.000e-91
Identity = 139/181 (76.80%), Postives = 151/181 (83.43%), Query Frame = 0
Query:    1 MTELSRLEIRVGRCLEATKHPDADSLYVENVDFGEGEPRTIVSGLVAYVPEEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAKVGELVTFEGVLSAPAPPGGAASRAWSATMEGMKTTGTRSVPSAVPPEGDDGGGGGVAGWNGRPMQTSAGPCTSTVVAGRVR 181
            M ELSRLEIRVGRCLE +KHPDADSLYVE +DFGEGEPRTIVSGLVAYVPE+EMRGRMV+GLCNLP RAMRGVTS+GMLLCASNDDH+ VDPLSPPEGAK+GEL+TFEGVLSAPAPP   ASRAWSAT EGMKT    +    V          GVAGW+GRPM TSAG CTS++ AGRVR
Sbjct:    1 MMELSRLEIRVGRCLECSKHPDADSLYVETIDFGEGEPRTIVSGLVAYVPEDEMRGRMVVGLCNLPSRAMRGVTSSGMLLCASNDDHSSVDPLSPPEGAKIGELITFEGVLSAPAPPSSGASRAWSATREGMKTA--EATADGV----------GVAGWDGRPMLTSAGACTSSIAAGRVR 169          
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Match: D7FK87_ECTSI (Similar to Tyrosyl-tRNA synthetase, cytoplasmic (Tyrosyl--tRNA ligase) (TyrRS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK87_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 3.190e-85
Identity = 139/188 (73.94%), Postives = 149/188 (79.26%), Query Frame = 0
Query:    1 MTELSRLEIRVGRCLEATKHPDADSLYVENVDFGEGEPR-------TIVSGLVAYVPEEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAKVGELVTFEGVLSAPAPPGGAASRAWSATMEGMKTTGTRSVPSAVPPEGDDGGGGGVAGWNGRPMQTSAGPCTSTVVAGRVR 181
            M ELSRLEIRVGRCLE +KHPDADSLYVE VDFGEGEPR       TIVS LVAYVPE EMRGRMV+GLCNLP RAMRGVTS+GMLLCASNDDH+ VDPLSPPEGAK+GEL+TFE VLSAPAPP   ASRAWSATMEGMKT    +    V          GVAGW+GRPM TSAG CTS++ AGRVR
Sbjct:  118 MMELSRLEIRVGRCLECSKHPDADSLYVETVDFGEGEPRCLGPVDKTIVSRLVAYVPENEMRGRMVVGLCNLPSRAMRGVTSSGMLLCASNDDHSSVDPLSPPEGAKIGELITFESVLSAPAPPSSGASRAWSATMEGMKTA--EATADGV----------GVAGWDGRPMLTSAGACTSSIAAGRVR 293          
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 178 bits (452), Expect = 1.010e-52
Identity = 98/173 (56.65%), Postives = 115/173 (66.47%), Query Frame = 0
Query:    1 MTELSRLEIRVGRCLEATKHPDADSLYVENVDFGEGEPRTIVSGLVAYVPEEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAKVGELVTFEGVLSAPAPPGGAASRAWSATMEGMKTTGTRSVPSAVPPEGDDGGGGGVAGWNGRPMQTSAGPCTS 173
            +TELSRLEIRVG+ +E  KHPDAD+LYVE VD GE EPRTIVSGLV Y+P E+M GR V+ LCNL  RAMRGVTS GMLLCASN+DHT+VDPL  P+   +GELVTFEG  SAP  P   A++A+    +G+ T                    GVA +   P  TSAGPC S
Sbjct:  115 LTELSRLEIRVGKIIECEKHPDADTLYVEKVDVGEEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEA-----------------GVAMFEDVPFSTSAGPCFS 270          
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 162 bits (411), Expect = 4.010e-47
Identity = 89/173 (51.45%), Postives = 109/173 (63.01%), Query Frame = 0
Query:    1 MTELSRLEIRVGRCLEATKHPDADSLYVENVDFGEGEPRTIVSGLVAYVPEEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAKVGELVTFEGVLSAPAPPGGAASRAWSATMEGMKTTGTRSVPSAVPPEGDDGGGGGVAGWNGRPMQTSAGPCTS 173
            +TELSRLEIRVG+ +E  +HPDAD+LYVE VD GE EPRTIVSGLV ++ +EE+ GR V+ LCNL  RAMRG+ S GMLLCASN+DHT VDPL+ P  A +G L+TFEG  +AP   G  AS+A+        T                    G+A +N  P  T AG C S
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVGEDEPRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTDAD-----------------GIARFNATPFMTEAGACYS 223          
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.270e-45
Identity = 93/181 (51.38%), Postives = 118/181 (65.19%), Query Frame = 0
Query:    1 MTELSRLEIRVGRCLEATKHPDADSLYVENVDFGEGE-PRTIVSGLVAYVPEEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAKVGELVTFEGVLSAPAPPGGAASRAWSATMEGMKTTGTRSVPSAVPPEGDDGGGGGVAGWNGRPMQTSAGPCTSTVVAGRV 180
            +TELSRLEIR G+ LE ++HP+AD LYVE +D GE + PRTIVSGLV Y  EEE+ GR V+ L NL  RA++G+TS GMLLCASN+DHT+V PLSPP G  +GEL+TFEG  +AP PPG  A +A+    E +               G+D     +A + G P  TS GP T T +AG +
Sbjct:  197 LTELSRLEIRTGKILEISRHPEADGLYVEKIDLGEADGPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEELGA-------------GEDM----IATYKGIPFMTSKGPVT-TGMAGSI 359          
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 158 bits (399), Expect = 5.220e-45
Identity = 91/174 (52.30%), Postives = 112/174 (64.37%), Query Frame = 0
Query:    1 MTELSRLEIRVGRCLEATKHPDADSLYVENVDFG-EGEPRTIVSGLVAYVPEEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAKVGELVTFEGVLSAPAPPGGAASRAWSATMEGMKTTGTRSVPSAVPPEGDDGGGGGVAGWNGRPMQTSAGPCTS 173
            +TELSRLEIRVG+ ++  KHP+ADSLYVE VD G E   R IVSGLV++VP EEM  R V+ LCNL  R MRG++S GMLLCASN+DH+ VDPL+ PEG  +G LVTFEG  S PAP G  AS+A+    + ++T  T                 GVA +   P  T +GPC S
Sbjct:   92 LTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVGDESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQVDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTDAT-----------------GVAMFEQVPFATPSGPCFS 248          
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Match: A0A7S1TKX4_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TKX4_9RHOD)

HSP 1 Score: 160 bits (404), Expect = 6.830e-45
Identity = 86/136 (63.24%), Postives = 97/136 (71.32%), Query Frame = 0
Query:    1 MTELSRLEIRVGRCLEATKHPDADSLYVENVDFGEGEPRTIVSGLVAYVPEEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAKVGELVTFEGVLSAPAPPGGAASRAWSATMEGMKTTG 136
            +TE SRLEIRVGR LE  KHPDAD+LYVE VD GE E RTIVSGLV YVP +EM GR V+ LCNL  RAMRGVTS GMLLCASN+DHT VDPL+ PE   +G L+T  G  SAP   G  AS+A+       +T G
Sbjct:  170 VTEFSRLEIRVGRILECEKHPDADTLYVEKVDVGEPETRTIVSGLVKYVPLDEMIGRTVVVLCNLKPRAMRGVTSFGMLLCASNEDHTEVDPLTAPEDTPIGTLITAPGHRSAPVEAGNRASKAFDRVAAQFRTDG 305          
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Match: A0A7S0FZY8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZY8_9RHOD)

HSP 1 Score: 157 bits (398), Expect = 1.790e-44
Identity = 79/134 (58.96%), Postives = 98/134 (73.13%), Query Frame = 0
Query:    1 MTELSRLEIRVGRCLEATKHPDADSLYVENVDFGEGEPRTIVSGLVAYVPEEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAKVGELVTFEGVLSAPAPPGGAASRAWSATMEGMKT 134
            +TELSRLEIR G  ++  KHP+AD+LYVE +D GE EPRTIVSGLV ++ EEE+ GR V+ LCNL  R MRG+ S GMLLCASN DH+ VDPLSPPE    GEL+TF+G  SAP  PG  A++A+    + + T
Sbjct:  126 LTELSRLEIRAGTVVQCKKHPEADTLYVETIDVGEQEPRTIVSGLVKFLSEEELTGRRVVVLCNLKPRTMRGIISQGMLLCASNADHSEVDPLSPPEECGNGELITFDGHKSAPIDPGNRATKAFDRVADDLST 259          
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Match: A0A0G4EPM0_VITBC (Tryptophan--tRNA ligase n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EPM0_VITBC)

HSP 1 Score: 161 bits (407), Expect = 3.170e-43
Identity = 82/130 (63.08%), Postives = 98/130 (75.38%), Query Frame = 0
Query:    3 ELSRLEIRVGRCLEATKHPDADSLYVENVDFGEGEPRTIVSGLVAYVPEEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAKVGELVTFEGVLSAPAPPGGAASRAWSATMEGM 132
            ++S LEIRVGR LE  +HPDADSLYVE VD GEGEPRTIVSGLV Y+ +EE++GR V+ LCNL  RAMRG+ S GMLLC+S+ D T V PLSPPEGA +GELVTF+G  S P  PG  A +A+    E +
Sbjct:  457 DISLLEIRVGRILEVERHPDADSLYVEKVDLGEGEPRTIVSGLVPYLSQEELQGRNVIVLCNLKPRAMRGIKSEGMLLCSSSPDGTRVAPLSPPEGAALGELVTFDGWASEPVAPGNKAGKAFDRVAEDL 586          
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 3.420e-43
Identity = 77/128 (60.16%), Postives = 97/128 (75.78%), Query Frame = 0
Query:    1 MTELSRLEIRVGRCLEATKHPDADSLYVENVDFGEGE---PRTIVSGLVAYVPEEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAKVGELVTFEGVLSAPAPPGGAASRAW 125
            +TEL+RLEIR+G+ +E  +HPDADSLYVE VD G+GE   PRTIVSGLV +  E ++ GR V+ LCNL    M+GVTSAGMLLC+SN+DH+ V+PL PPEG  +GELVTF+G L +P   G  A +AW
Sbjct:   89 LTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAW 216          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig92.18218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCD4_9PHAE4.000e-9176.80tRNA-binding domain-containing protein n=1 Tax=Ect... [more]
D7FK87_ECTSI3.190e-8573.94Similar to Tyrosyl-tRNA synthetase, cytoplasmic (T... [more]
A0A2V3IUX7_9FLOR1.010e-5256.65Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]
A0A7S0ZE83_9RHOD4.010e-4751.45Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
W7U6C4_9STRA2.270e-4551.38Endothelial monocyte-activating polypeptide ii pro... [more]
A0A5J4Z2W6_PORPP5.220e-4552.30Putative methionine--tRNA ligase n=1 Tax=Porphyrid... [more]
A0A7S1TKX4_9RHOD6.830e-4563.24Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A7S0FZY8_9RHOD1.790e-4458.96Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A0G4EPM0_VITBC3.170e-4363.08Tryptophan--tRNA ligase n=3 Tax=Vitrella brassicaf... [more]
D7FMW6_ECTSI3.420e-4360.16Endothelial monocyte-activating polypeptide II pro... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 9..103
e-value: 1.4E-27
score: 95.6
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 3..106
score: 29.783
NoneNo IPR availableGENE3D2.40.50.140coord: 2..180
e-value: 1.0E-47
score: 164.0
NoneNo IPR availablePANTHERPTHR11586:SF39NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEINcoord: 5..137
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 5..137
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 4..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig92contigL-elsbetiae_contig92:7866..9739 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig92.18218.1mRNA_L-elsbetiae_contig92.18218.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig92 7718..12898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig92.18218.1 ID=prot_L-elsbetiae_contig92.18218.1|Name=mRNA_L-elsbetiae_contig92.18218.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
MTELSRLEIRVGRCLEATKHPDADSLYVENVDFGEGEPRTIVSGLVAYVP
EEEMRGRMVLGLCNLPERAMRGVTSAGMLLCASNDDHTIVDPLSPPEGAK
VGELVTFEGVLSAPAPPGGAASRAWSATMEGMKTTGTRSVPSAVPPEGDD
GGGGGVAGWNGRPMQTSAGPCTSTVVAGRVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold