prot_L-elsbetiae_contig9085.18115.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9085.18115.1
Unique Nameprot_L-elsbetiae_contig9085.18115.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length65
Homology
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Match: D7G7U8_ECTSI (Thylakoid lumenal 15 kDa protein, chloroplast (P15) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U8_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 4.010e-30
Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    5 VVTEAYVSGATKMEPAIVEGADFTDTFLRKDQVKYLCELGNTKGTNPVTGVDTRDSLGCP 64
            +VTEAYVSGATKMEPAI+EGADFTDTFLRKDQV+YLC L   KGTNPV+GVDTRDSLGCP
Sbjct:  186 LVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLETAKGTNPVSGVDTRDSLGCP 245          
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Match: A0A835YUD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.110e-20
Identity = 41/54 (75.93%), Postives = 44/54 (81.48%), Query Frame = 0
Query:   10 YVSGATKMEPAIVEGADFTDTFLRKDQVKYLCELGNTKGTNPVTGVDTRDSLGC 63
            YVSGATK EP  +EGADFTDTFLRKDQ+ YLC +   KGTNPVTGVDT DSL C
Sbjct:  181 YVSGATKFEPKDIEGADFTDTFLRKDQIMYLCAIA--KGTNPVTGVDTADSLSC 232          
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Match: A0A448ZI41_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI41_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.930e-18
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    1 MRNAVVTEAYVSGATKMEPA-IVEGADFTDTFLRKDQVKYLCELGNTKGTNPVTGVDTRDSLGC 63
            ++N V+ E YVSGAT  E    +EG+D+++TFLRKDQ KYLCE    KGTNPVTGVDTR+SL C
Sbjct:  170 LKNTVMKEVYVSGATLFEGVKSIEGSDWSETFLRKDQQKYLCEHPTAKGTNPVTGVDTRESLMC 233          
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Match: A0A1Z5JIU4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIU4_FISSO)

HSP 1 Score: 83.6 bits (205), Expect = 2.090e-18
Identity = 41/65 (63.08%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    1 MRNAVVTEAYVSGATKMEPAI-VEGADFTDTFLRKDQVKYLCELGNTKGTNPVTGVDTRDSLGCP 64
            MRNAV  E YVSG+T  E    +E +D+TDT+LR DQ KYLC     KGTNPVTGVDTR+SL CP
Sbjct:  139 MRNAVAREMYVSGSTLFEGIKDIENSDWTDTYLRADQQKYLCNHPTAKGTNPVTGVDTRESLMCP 203          
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Match: A0A7S1QSD0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QSD0_ALECA)

HSP 1 Score: 84.3 bits (207), Expect = 2.150e-18
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    3 NAVVTEAYVSGATKMEPAIVEGADFTDTFLRKDQVKYLCELGNTKGTNPVTGVDTRDSLGCP 64
            NA+ T+ YV+G T+MEP  ++GADFT T  RKDQ+ YLC++   +GTNPVT VDTR+SL CP
Sbjct:  181 NAIATDMYVNGTTRMEPKRIDGADFTGTIFRKDQLNYLCKIA--EGTNPVTKVDTRESLMCP 240          
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Match: A0A7S3L2E8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2E8_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.260e-18
Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    2 RNAVVTEAYVSGATKMEPAI-VEGADFTDTFLRKDQVKYLCELGNTKGTNPVTGVDTRDSLGCP 64
            +NA++ E YVSGAT  E    +EG+D+TDT LRKDQ KYLC     KGTNPVTGVDTR+SL CP
Sbjct:  180 KNAILKEMYVSGATLFEGVKDIEGSDWTDTELRKDQKKYLCNHPTAKGTNPVTGVDTRESLMCP 243          
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Match: K0REL3_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0REL3_THAOC)

HSP 1 Score: 80.9 bits (198), Expect = 3.580e-18
Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    1 MRNAVVTEAYVSGATKMEPA-IVEGADFTDTFLRKDQVKYLCELGNTKGTNPVTGVDTRDSLGC 63
            + NA+V E YVSGAT  E    +E +D++DT LRKDQ KYLCE    KGTNPVTGVDTR+SL C
Sbjct:   57 VENAIVKEMYVSGATLFEGVKSIENSDWSDTQLRKDQQKYLCEHPTAKGTNPVTGVDTRESLMC 120          
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Match: A0A7S0MF80_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MF80_9CRYP)

HSP 1 Score: 82.4 bits (202), Expect = 1.450e-17
Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   10 YVSGATKMEPAIVEGADFTDTFLRKDQVKYLCELGNTKGTNPVTGVDTRDSLGCP 64
            Y+ G TK++   +EGADFTDTFLRKDQ+KYLC     KGTNP TGV T +SLGCP
Sbjct:  202 YILGTTKLDGVQIEGADFTDTFLRKDQIKYLC--ARAKGTNPTTGVSTTESLGCP 254          
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Match: A0A7R9WPJ1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WPJ1_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.790e-17
Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    1 MRNAVVTEAYVSGATKMEPAI-VEGADFTDTFLRKDQVKYLCELGNTKGTNPVTGVDTRDSLGC 63
            + N V+ E YVSGAT  E    +EG+D+TDT+LRKDQ KYLC     KGTNPVTGVDTR+SL C
Sbjct:  238 LHNTVLREMYVSGATLFEGIKDIEGSDWTDTYLRKDQQKYLCNHPTAKGTNPVTGVDTRESLMC 301          
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Match: B7FVL0_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVL0_PHATC)

HSP 1 Score: 78.6 bits (192), Expect = 3.650e-17
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    4 AVVTEAYVSGATKMEPAI-VEGADFTDTFLRKDQVKYLCELGNTKGTNPVTGVDTRDSLGCP 64
            AVVT+AYVSGAT  +    VEG+D+++T+LR DQ K LC     KGTNPVTGVDTR+SL CP
Sbjct:   69 AVVTDAYVSGATIFDGVKDVEGSDWSETYLRADQKKLLCNHPTAKGTNPVTGVDTRESLMCP 130          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9085.18115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7U8_ECTSI4.010e-3086.67Thylakoid lumenal 15 kDa protein, chloroplast (P15... [more]
A0A835YUD1_9STRA3.110e-2075.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A448ZI41_9STRA1.930e-1862.50Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Z5JIU4_FISSO2.090e-1863.08Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1QSD0_ALECA2.150e-1859.68Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S3L2E8_9STRA2.260e-1864.06Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
K0REL3_THAOC3.580e-1862.50Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S0MF80_9CRYP1.450e-1765.45Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7R9WPJ1_9STRA2.790e-1762.50Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
B7FVL0_PHATC3.650e-1762.90Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.100coord: 1..64
e-value: 2.7E-10
score: 41.6
NoneNo IPR availablePANTHERPTHR47121:SF2THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTICcoord: 1..63
NoneNo IPR availablePANTHERPTHR47121FAMILY NOT NAMEDcoord: 1..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9085contigL-elsbetiae_contig9085:2585..3236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9085.18115.1mRNA_L-elsbetiae_contig9085.18115.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9085 2564..3236 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9085.18115.1 ID=prot_L-elsbetiae_contig9085.18115.1|Name=mRNA_L-elsbetiae_contig9085.18115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=65bp
MRNAVVTEAYVSGATKMEPAIVEGADFTDTFLRKDQVKYLCELGNTKGTN
PVTGVDTRDSLGCP*
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