prot_L-elsbetiae_contig9074.18107.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig9074.18107.1
Unique Name	prot_L-elsbetiae_contig9074.18107.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	156

Homology

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BLAST of mRNA_L-elsbetiae_contig9074.18107.1 vs. uniprot
Match: A0A6H5J638_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J638_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 3.050e-10
Identity = 56/113 (49.56%), Postives = 66/113 (58.41%), Query Frame = 0

Query:   39 VAALENAAWRSLRDLRAMCLSSAASPPPPSPGFSLAALPDRPSSESPRPSSSSSEGRGAPGVSATKATSRSRAAARRLCRQARSRGVLGSLVSICAPFPWTPVVAPPPPPLNA 151
            +AA+E AAWRSLRDL+AMC   AAS P PS   S   +   P S         + G G   V+    T+    A +RL  QA+SRGVL SLV+ICAPFPWTPVV    P LNA
Sbjct:  758 MAAIEAAAWRSLRDLQAMC--PAASAPFPSRAVSFTDVFSAPPS---------ANGGGYSAVAGATTTANENMA-QRLRSQAKSRGVLDSLVAICAPFPWTPVV----PQLNA 854

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig9074.18107.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig9074.18107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5J638_9PHAE	3.050e-10	49.56	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..156
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig9074	contig	L-elsbetiae_contig9074:3756..4223 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig9074.18107.1	mRNA_L-elsbetiae_contig9074.18107.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig9074 3756..4223 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig9074.18107.1 ID=prot_L-elsbetiae_contig9074.18107.1|Name=mRNA_L-elsbetiae_contig9074.18107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
AGSAAAGIAAAAVAVAGVPAGGPPLRRESPSPLPSPLDVAALENAAWRSL
RDLRAMCLSSAASPPPPSPGFSLAALPDRPSSESPRPSSSSSEGRGAPGV
SATKATSRSRAAARRLCRQARSRGVLGSLVSICAPFPWTPVVAPPPPPLN
ATPSAA