prot_L-elsbetiae_contig907.18102.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig907.18102.1
Unique Nameprot_L-elsbetiae_contig907.18102.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length582
Homology
BLAST of mRNA_L-elsbetiae_contig907.18102.1 vs. uniprot
Match: D7G549_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G549_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 3.770e-10
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 0
Query:  425 LHDAPELASIMIGNGDLLFYSLGPAVFSFAAPLFRMRGLIFSNARQMVGGPVACASTALFGVALASRYS---RHPPWKRHKIK 504
            L D PE     +G G++L+  LGPAV SFAAPLFRMRG I  NAR ++ G + CA+T+L GV  A + +     PP +  KI+
Sbjct:   28 LQDGPE-----VGAGNVLYRLLGPAVLSFAAPLFRMRGFILGNARPVLAGSIFCAATSLLGVPKAFQVAFRAEAPPSRGSKIR 105          
BLAST of mRNA_L-elsbetiae_contig907.18102.1 vs. uniprot
Match: A0A6H5L6P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6P9_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 3.600e-8
Identity = 42/102 (41.18%), Postives = 54/102 (52.94%), Query Frame = 0
Query:   44 GGSVAARGTGHGRKSLFSAFSVGRGTVGDHPPSSSR------GNPAAGLVGGTAGEASPPLRSSLAMLPIIAADLGLRELFHRLGWSFPSSFAGMMALFAGL 139
            G     RG  H + S FS    G   + D PPS S       G P   L+ G     +P     L+ML ++AAD+GL +LF +LGWSFPS  AGM+ LFAG+
Sbjct:   14 GDDAPGRGRAHRQASPFSVSFAGARDLEDEPPSPSPLPPAPFGTPVFALLMGPREVLTP-----LSMLLLVAADVGLHQLFGQLGWSFPSCVAGMVGLFAGV 110          
BLAST of mRNA_L-elsbetiae_contig907.18102.1 vs. uniprot
Match: A0A0G4FYW4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FYW4_9ALVE)

HSP 1 Score: 65.5 bits (158), Expect = 2.080e-7
Identity = 28/79 (35.44%), Postives = 48/79 (60.76%), Query Frame = 0
Query:   99 RSSLAMLPIIAADLGLRELFHRLGWSFPSSFAGMMALFAGLVGLDRVAPPYAERAVRLLEPGSTQLMAWLPVVFVPAII 177
            R++ A+  ++  D+GLR +F +  WSFPS+ AGM+ L   L+G + + P ++   +  L PGS  L  W+P+ FV  ++
Sbjct:  241 RTAAAVAGLVGIDVGLRAVFAKCRWSFPSNLAGMLGLSGLLMGGEVLVPGFSRSILEFLRPGSEYLSFWMPLFFVTGLV 319          
BLAST of mRNA_L-elsbetiae_contig907.18102.1 vs. uniprot
Match: A0A6H5JFF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFF4_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 4.440e-6
Identity = 39/102 (38.24%), Postives = 54/102 (52.94%), Query Frame = 0
Query:   44 GGSVAARGTGHGRKSLFSAFSVGRGTVGDHPPSSSR------GNPAAGLVGGTAGEASPPLRSSLAMLPIIAADLGLRELFHRLGWSFPSSFAGMMALFAGL 139
            G     RG+ H +   FS      G + D PPS S       G P + L+ G        + ++L+ML ++AAD+GL     RLGWSFPSS AG++ LFAG+
Sbjct:  103 GNDAPGRGSAHRQAPPFSVSFAEAGDLEDEPPSPSPLPPAPFGTPVSALLMGPR-----EVLTTLSMLLLVAADVGLPHFSGRLGWSFPSSVAGVVGLFAGV 199          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig907.18102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G549_ECTSI3.770e-1046.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6P9_9PHAE3.600e-841.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4FYW4_9ALVE2.080e-735.44Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A6H5JFF4_9PHAE4.440e-638.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007300CidB/LrgB familyPANTHERPTHR30249PUTATIVE SEROTONIN TRANSPORTERcoord: 106..491
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 325..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 347..372
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 441..460
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 373..392
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..184
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 461..471
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..301
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..254
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 493..581
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 302..324
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 472..492
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 185..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 416..440
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 393..415
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.594
NoneNo IPR availableTMHMMTMhelixcoord: 391..413
NoneNo IPR availableTMHMMTMhelixcoord: 471..493
NoneNo IPR availableTMHMMTMhelixcoord: 434..456
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 302..324
NoneNo IPR availableTMHMMTMhelixcoord: 232..254
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 347..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig907contigL-elsbetiae_contig907:7176..17530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig907.18102.1mRNA_L-elsbetiae_contig907.18102.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig907 7140..18437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig907.18102.1 ID=prot_L-elsbetiae_contig907.18102.1|Name=mRNA_L-elsbetiae_contig907.18102.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=582bp
MMRYQSFGQVAFLLLCGRSFGQAAQRWPSRSPGPRQRDAQIRAGGSVAAR
GTGHGRKSLFSAFSVGRGTVGDHPPSSSRGNPAAGLVGGTAGEASPPLRS
SLAMLPIIAADLGLRELFHRLGWSFPSSFAGMMALFAGLVGLDRVAPPYA
ERAVRLLEPGSTQLMAWLPVVFVPAIIPWIRLPIAGLLGSSSSLPETVVA
AAKLGGALGDYSPLPSPPGTARLRVVGNAAKLMLAVAGGWLWSLGSAAAI
FTALSPPLPPAPTSSSSFALFPTARTSAPPSLRAAKTGAVGSATAGFFSR
RLVRWLGVGMVAAGALSAASFASLDNVAFWPSFFETFRFPLTSFEKWLLG
FLVLMIPGVYGAVLSIGLASLFGFAAGRLGVSPGGTPARSCPAWMTVLLP
LATSAAATLAAGWTMRSAALGVFDLHDAPELASIMIGNGDLLFYSLGPAV
FSFAAPLFRMRGLIFSNARQMVGGPVACASTALFGVALASRYSRHPPWKR
HKIKYDTPTDTSTDVDTPQNLYFVLGARPSAINDAVGMRTACLATVSALF
RARIYFSEQSPSETYRSWWQSRSGQSCLTNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007300CidB/LrgB