prot_L-elsbetiae_contig906.18092.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig906.18092.1
Unique Nameprot_L-elsbetiae_contig906.18092.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length632
Homology
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BLAST of mRNA_L-elsbetiae_contig906.18092.1 vs. uniprot
Match: A0A6H5KKU1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKU1_9PHAE)

HSP 1 Score: 468 bits (1205), Expect = 4.870e-146
Identity = 225/269 (83.64%), Postives = 242/269 (89.96%), Query Frame = 0 
Query:  364 VRADPTSHQHKRPVQSATDQNPLALPWFSGKHNNPCSICEDLWKVAWSAREDFLRDLKQAEGEKGYQLVASSGDNLRLYAAANMFWGGQAIRLRVEMEVAVPLGFAMRWLASLTARGGVYYPYSETTQCDAVESDKGALSVACAHWGTNLSGPRRCTLMRYVSEDGSPPPGLEVCVCVCVSEPRDARPTIVFTTIEHPIMREWAQPGVDVEVFPSGLVLEQMESPAASAPCGPVTKVHGLIGWDNKGTVQHMAKMSYMTERADRLEGLG 632
            V ADP+SHQHKRPVQSA DQNPLALPWF+GKH +PCS+CEDLW+VAWSAREDFLRDL +AEG+KGY LVASSGDNLRLYAAANMFWGGQAIRLRVEMEVAVPLGFAMRWLASLTARGGVYYPYS+T  CD VES  GALSVAC+HW TNLSG RRCTL+RYVSEDGSPPPG+     +   +PRD+RPTIVFTTIEHPIMREWA  GVDVEVFPSGLVLE+MESPA     GPVT+VHGLIGWDNKGT+QHMAKMSYMTERADRLEGLG
Sbjct:  200 VHADPSSHQHKRPVQSAKDQNPLALPWFTGKHTSPCSVCEDLWRVAWSAREDFLRDLGRAEGQKGYNLVASSGDNLRLYAAANMFWGGQAIRLRVEMEVAVPLGFAMRWLASLTARGGVYYPYSDTVPCDMVESSNGALSVACSHWTTNLSGTRRCTLLRYVSEDGSPPPGVADDPSLA-GKPRDSRPTIVFTTIEHPIMREWALAGVDVEVFPSGLVLEEMESPA-----GPVTRVHGLIGWDNKGTLQHMAKMSYMTERADRLEGLG 462
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig906.18092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKU1_9PHAE4.870e-14683.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 105..164
e-value: 3.7E-4
score: 24.3
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 106..161
e-value: 1.7E-11
score: 44.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 101..174
e-value: 9.0E-13
score: 49.8
NoneNo IPR availablePANTHERPTHR39490FAMILY NOT NAMEDcoord: 108..163
NoneNo IPR availablePANTHERPTHR39490:SF6ARRESTIN DOMAIN-CONTAINING PROTEIN Dcoord: 108..163
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 104..163
score: 11.515
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 106..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig906contigL-elsbetiae_contig906:22890..30590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig906.18092.1mRNA_L-elsbetiae_contig906.18092.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig906 22890..30590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig906.18092.1 ID=prot_L-elsbetiae_contig906.18092.1|Name=mRNA_L-elsbetiae_contig906.18092.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=632bp
RFAAPARGSGSRMSDNEDVQLPIPSRAAGVYSSGVSSLRSGLGGTVPGRS
SRKVGLEGLRTASSRRLNLSSFTSNGSNKGMNGENPEGSATGSMAGGGRG
GGGGTQSKLCSACGFQFTWRMRRHHCRGCKKAVCDPCSKERLQIVGGDNK
RHRVCHNCIKQHLASGRTREDRVSDTYVYATTDLRSSPFESRDTSRNASR
DVSRHGAGGSTGLATYAEGQEPGEQQPPPFEAVEAAGQEETKFGGGVSGG
GAAAAAATSAAETAAAMAAAWTRSSAPASTTAETATATTTSSAEQATATA
TAALTPELVVSADASSGEGPTAGDEVAVATAVGVAVGVATVDGGGRPSAG
EAAPRGRPPPGTGVRADPTSHQHKRPVQSATDQNPLALPWFSGKHNNPCS
ICEDLWKVAWSAREDFLRDLKQAEGEKGYQLVASSGDNLRLYAAANMFWG
GQAIRLRVEMEVAVPLGFAMRWLASLTARGGVYYPYSETTQCDAVESDKG
ALSVACAHWGTNLSGPRRCTLMRYVSEDGSPPPGLEVCVCVCVSEPRDAR
PTIVFTTIEHPIMREWAQPGVDVEVFPSGLVLEQMESPAASAPCGPVTKV
HGLIGWDNKGTVQHMAKMSYMTERADRLEGLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD