prot_L-elsbetiae_contig906.18091.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig906.18091.1
Unique Nameprot_L-elsbetiae_contig906.18091.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length810
Homology
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Match: D8LNH6_ECTSI (RNA polymerase sigma factor SigD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNH6_ECTSI)

HSP 1 Score: 665 bits (1717), Expect = 2.060e-226
Identity = 476/819 (58.12%), Postives = 547/819 (66.79%), Query Frame = 0
Query:   84 GAEGVAVPLPKTYSRKGKWTVYNSV---SPKKQRAPNRVLSKEAQAKREKEYELGTKIQAMMKLQKLKDTLRPASGEEAVNNEAWAKAAGETVESLRRALEEGANAKEEMAVLSNLSLVDIIVKNYVRCFSYGRFTETDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELALEAGLTVQQVEACLEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYGVDMLGPTAGEGLEPTPEGAKVVQVSIREDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEETAEIMDFCDPDDVRIITTQAMKKLREGCLPEERKKLMSYLSVYEPKSTNYSKTKYDPAISK-GKQDSSSSYASIRSSI-----------DSIIXXXXXXXQTPGDS--ATDGETS-------IDTDRQGWAEDAGMEASAVAAGRSSNG-------EERLGVWEATTESQELVSAKQER---RGAQ-------------EEGLGDGEENQERQVWEAGFSSD---AXXXXXXXXXXQQGRKLKVNSDDTGGASGRG----RGEERELWDFSKHGQEELQQELTRYLRRHRLAKKNAEKAAALAAENALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSSTRLGRYSRSAVDLARQQREEXXXXXXXXXXXXXXXXXXXXXX----------------------------------------WRRKQAGRPIPVGNGAGSAVVGDLEPMPNSREADQLESLSRLLWDGQGEPEDFALSYGKQPE 808
            G EG   P PK Y R GKWTVY+S    +P + R PN+ LSK+AQA+R+KEYELGTKIQ MMKL KLKD L+PA+GE+ V++E WA+ A E+VESLR+AL+EG  AK+E+ VL NL+LVDIIVKNYV  F+YGRFTE DL QDATVGLIRAVEKFDPE+GF F+TYGRWWVRK+LHEGVQNH+RMVRIPNSAAYRIAKVKR+R ELE ELGR PT+PE+ALE  LTVQQVEACLEQD+F IERLD YMG+GFG+AD +FAS +GE F+YG DML    GE   PT EG KV+Q S+R DLSSAFVRLLDATERECLVLRYGLHDGVTNSIE+TA IMDFCDPDDVRIITTQAM KLR+GCLPEERKKLMSYLSVYEP + +YSK KYDP+ S+  K+ ++ S AS   +I           DS            GD+  AT+ E+S           + GW +  G E+ +  AG +  G       EE   +W +     E    + +R   RG               E G     E +ERQ+W  G  S               QQ R + VN    GG  GRG    +G+ER  WDFSKHGQEELQ ELTRYLR+HRLAKKNAEKAAAL AEN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        XXXXXXXXXXXXXXXXXXXXXX                                        W R+QA RP+PVGNGAGS V+GDLEP+ NSREADQLE LSRLLWDG+ EP DF+LSYGK+P+
Sbjct:    6 GREGPENP-PKNYRRNGKWTVYSSSGRGAPLQPRDPNQALSKKAQARRDKEYELGTKIQRMMKLLKLKDVLQPAAGEDEVSSEVWAEGAMESVESLRQALDEGEKAKQEL-VLDNLNLVDIIVKNYVGTFAYGRFTEKDLTQDATVGLIRAVEKFDPEKGFFFATYGRWWVRKYLHEGVQNHNRMVRIPNSAAYRIAKVKRVRDELEGELGRAPTKPEIALETDLTVQQVEACLEQDSFRIERLDGYMGHGFGMADTVFASHFGEGFLYGSDML-THPGETPAPTVEGEKVIQSSLRGDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEQTAAIMDFCDPDDVRIITTQAMAKLRDGCLPEERKKLMSYLSVYEPSTPSYSKGKYDPSKSRRNKRLATDSRASTSGAISSGSRVGDGGDDSTTANAAGAAVDRGDARTATERESSRRVVGDFSKIGKPGWMKPNGYESGSAGAGGAGAGSRFFRSKEEERRMWASRFSKMEQEHERDDRARSRGVSGGRTVMGFNEVRDERGEKQRREEEERQLWGGGDRSGYPTTGTGRNTGDKQQQDRGVGVNGSSNGG--GRGVDNYKGDERRPWDFSKHGQEELQHELTRYLRKHRLAKKNAEKAAALKAENPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWEREQAVRPLPVGNGAGSVVIGDLEPVANSREADQLEHLSRLLWDGEEEPADFSLSYGKKPK 819          
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Match: UPI00194F0994 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Spirulina major TaxID=270636 RepID=UPI00194F0994)

HSP 1 Score: 136 bits (343), Expect = 9.780e-32
Identity = 108/313 (34.50%), Postives = 159/313 (50.80%), Query Frame = 0
Query:  129 EKEYELGTKIQAMMKLQKLKDTLRPASGEEAVNNEAWAKAAGETVESLRRALEEGANAKEEMAVLSNLSLVDIIVKNYVRCFSYGRFTETDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELALEAGLTVQQVEACLEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYGVDMLGPTAGEGLEP---TPEGAKVVQVSIREDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEETAEIMDFCDPDDVRIITTQAMKKLRE 438
            E+E  L  +IQ  + LQ++K+  + +  E  +  EAWAKAAG T   +RR ++ G  AK +M V +NL LV  + K Y++          DL Q+ T+G+ R VEKFDP +G+ FSTY  WW+R+ +   +    RM+R+P     ++ K+K+ + +L  +LGR  T PEL  E  LT QQV  CLE+ A +   LD  +G                      D      GE LE    TPE     Q S++ DL    V L    +RE + LRYGL DG   ++ +    +     + VR +  +A+KKLR+
Sbjct:   27 EEEIVLAKRIQKAIALQQIKEE-QESQQENELTLEAWAKAAGMTTAEVRRIVDAGEMAKNKM-VEANLRLVVSVAKKYIK----RNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRMIRLPIHITEKLNKIKKAQRQLTQKLGRAATIPELGKELDLTPQQVRECLER-ARHPLSLDLRVG----------------------DNQDTELGELLEDDGQTPEEF-ATQSSLQLDLEKLMVDLTPQ-QREVIALRYGLRDGQPLTLAKIGTQLGIS-RERVRQLEREALKKLRQ 307          
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Match: UPI0003460C22 (RNA polymerase sigma factor RpoD n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI0003460C22)

HSP 1 Score: 137 bits (344), Expect = 3.530e-31
Identity = 107/319 (33.54%), Postives = 164/319 (51.41%), Query Frame = 0
Query:  129 EKEYELGTKIQAMMKLQKLKDTLRPASGEEAVNNEAWAKAAGETVESLRRALEEGANAKEEMAVLSNLSLVDIIVKNYVRCFSYGRFTETDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELALEAGLTVQ---------QVEACLEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYGVDMLGPTAGEGLEPTPEGAKVVQVSIREDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEETAEIMDF-CDPDDVRIITTQAMKKLR 437
            ++E ELG KI  +++L+++++ L  +  E +  +  WA A G  + + R+ L++G  AK++M V SNL LV  I + Y+    Y   +  DL Q+ ++GLIRA EKFD E+G+ FSTY  WW+R+ +  G+ N  R +R+P      I ++K+    L  E+GR+PT  E+A    ++++         Q+   LE   +  E  D  + Y   + D +                     E  E TPE   V +  +REDL SA +  L   ER  L  RYGL DG   S+EE  EI +  CD   VR I  +A++KLR
Sbjct:   95 DEEIELGRKIADLLELERVREQLC-SELERSPKDAEWADAVGMPLPAFRQRLQQGRQAKDKM-VQSNLRLVVSIARKYI----YRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRGIANRSRTIRLPVRLYETIFRIKKTTKLLSQEMGRKPTEDEIADRMEMSIKKLRFITKSAQLPISLETPIWLEEEKDSGLKYFVRLGDFI---------------------ESDEETPEEC-VTKNLLREDLESA-LNTLRPRERNVLSRRYGLDDGRMKSLEEIGEIFNITCDI--VRQIEIEALRKLR 382          
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Match: A0A7C9TSD1_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TSD1_9CYAN)

HSP 1 Score: 134 bits (338), Expect = 4.510e-31
Identity = 105/310 (33.87%), Postives = 162/310 (52.26%), Query Frame = 0
Query:  129 EKEYELGTKIQAMMKLQKLKDTLRPASGEEAVNNEAWAKAAGETVESLRRALEEGANAKEEMAVLSNLSLVDIIVKNYVRCFSYGRFTETDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELALEAGLTVQQVEACLEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYGVDMLGPTAGEGLEPTPEGAKVVQVSIREDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEETAEIMDFCDPDDVRIITTQAMKKLRE 438
            E+E  LG ++Q    LQ++K+TL      E  + E WAK AG +   L++A+ +G  AK +M V +NL LV  + K Y++          DL Q+ T+G+ R VEKFDP +G+ FSTY  WW+R+ +   +    R +R+P     ++ K+KR + EL  +LGR  T  +L+ E  +T +Q+  CLE+    +  LD  +G      DN   ++ G       D+L     E   P+PE    VQ S+R DL      L D  +R  L LR+GL DG   ++ +  + +D    + VR I  +A+ KLR+
Sbjct:   27 EQEIVLGKQVQRFNSLQRIKETLAEKLDREPTHKE-WAKEAGMSGMELKQAIAQGKYAKTKM-VEANLRLVVSVAKKYIK----RNVDLLDLIQEGTIGMQRGVEKFDPSKGYRFSTYAYWWIRQAIVRAIAEKSRTIRLPIHVTEKLNKIKRAQRELSQKLGRAATISDLSQELEMTPKQIRECLERSRLPLS-LDLRVG------DNQ-DTELG-------DLL-----EDTGPSPEDY-AVQSSLRSDLQKLMSDLSDL-QRAVLSLRFGLEDGKPLTLAKVGDCLDMS-RERVRQIEREALAKLRK 307          
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Match: B8C5F0_THAPS (Sigma70_r2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5F0_THAPS)

HSP 1 Score: 135 bits (339), Expect = 5.980e-31
Identity = 106/319 (33.23%), Postives = 161/319 (50.47%), Query Frame = 0
Query:  131 EYELGTKIQAMMKLQKLKDTLRPASGEEAVNNEAWAKAAGE-TVESLRRALEEGANAKEEMAVLSNLSLVDIIVKNYVRCFSYGRFTETDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELALEAGLTVQQVEAC---LEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYGVDMLGPTAGEGLEPTPEGAKVVQVSIREDLSSAFVRLLDATERECLVLRYGLHD------GVTN--SIEETAEIMDFCDPDDVRIITTQAMKKLR 437
            E ELG K Q  M+LQK+ + L+   G E  ++E W  AAG+  +E+L + LEEG  AK ++ V SNL +V  +V  Y+R      +   DL QD T+ LIRA EK++PERGF FSTY  +W+R  +        R+V +P        +V +    L  ELGR+PT+ EL+    +TV Q++ C   ++Q AF ++              N +      S     D +       ++ T E  K  ++ ++E L S   R L   E + L+LRYGL D      G++   +I E ++++    PD VR I   + K+LR
Sbjct:   30 EKELGAKTQEAMRLQKMYEDLQSKHGREPTDDE-WCAAAGKINMEALEQVLEEGIEAKNQL-VASNLRMVQRVVNLYIRNGLGSEYNAGDLMQDGTMALIRAAEKYEPERGFRFSTYAMYWIRSAVKRSQTMQSRIVNVPQRIHETYKRVTKTEARLRKELGRDPTKVELSAACDITVVQLDRCRRAMQQAAFSLD----------AEVQNTYKPNNSNSRK---DTMYDLVASKVDET-EYEKTQRLLMKEHLISTLRRYLSPHEVDLLLLRYGLMDERALPKGMSGPLTIAEVSKLVGL-KPDKVRRIIINSQKQLR 331          
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Match: Q7NEW6_GLOVI (RNA polymerase sigma factor n=4 Tax=Gloeobacterales TaxID=307595 RepID=Q7NEW6_GLOVI)

HSP 1 Score: 132 bits (333), Expect = 5.230e-30
Identity = 108/330 (32.73%), Postives = 172/330 (52.12%), Query Frame = 0
Query:  128 REKEYELGTKIQAMMKLQKLKDTLRPASGEEAVNNEAWAKAAGETVESLRRALEEGANAKEEMAVLSNLSLVDIIVKNYVRCFSYGRFTET-DLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELALEAGLTVQQVEACLEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYGVDMLGPTAGEGLEPTPEGAKVVQVSIREDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEETAEIMDFCDPDDVRIITTQAMKKLREGCLPEERKKLMSYLSVYE 456
            R++E EL  ++Q +MKL  LK++L+ + G E  ++E WA+AA   +  L+R +  G+ AK++M + +NL LV  + K Y       R  E  DL Q+ T+GL RAVEKFDP +G+ FSTY  WW+R+ +   +    R +R+P     ++ ++K+ + +L   LGR PT  E+A E           LE +  ++  L   +     +   +   +  E        LG    E  E +PE +  VQ S+R D+    +  L   ER+ + +RYGL DG T S+ E    +D    + VR I ++A++KLR+   P  R K+  YL + E
Sbjct:   66 RDEEVELAQQVQKLMKLTALKESLQTSLGSE-YSDEQWAEAAKVGLFELKRQVLAGSRAKKKM-IEANLRLVVSVAKKY-----QNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIATQSRTIRLPVHITEKLNRIKKTQRKLSQNLGRTPTISEIAEE-----------LEMEPAHVRELMSRVPRSVSLETRVGKDKDTE--------LGELL-EAEEVSPEES-AVQESLRRDVKE-LLDDLTLRERDVITMRYGLLDGRTYSLSEIGRALDLS-RERVRQIESKALQKLRQ---PRRRAKVRDYLELME 362          
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Match: SIGA3_SYNE7 (RNA polymerase sigma factor SigA3 n=5 Tax=Synechococcus elongatus TaxID=32046 RepID=SIGA3_SYNE7)

HSP 1 Score: 131 bits (329), Expect = 7.350e-30
Identity = 103/328 (31.40%), Postives = 164/328 (50.00%), Query Frame = 0
Query:  129 EKEYELGTKIQAMMKLQKLKDTLRPASGEEAVNNEAWAKAAGETVESLRRALEEGANAKEEMAVLSNLSLVDIIVKNYVRCFSYGRFTETDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELALEAGLTVQQVEACLEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYGVDMLGPTAGEGLEP---TPEGAKVVQVSIREDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEETAEIMDFCDPDDVRIITTQAMKKLREGCLPEERKKLMSYLS 453
            E+E  LG ++Q  MKLQ+L+ TL+   G+   ++  WA AAG ++E LR+    G  AK +M + +NL LV  + K Y++          DL Q+ T+G+ R VEKFDP +G+ FSTY  WW+R+ +   +    R +R+P     ++ K+K+++ +L  +LGR  T PELA    LT  QV   LE+ A +   LD  +G                      D      G+ LE    TPE    +Q S+R D+     +L +  +R+ + LRYGL DG   ++    + +     + VR +  +A+  LR+      R ++  YL+
Sbjct:   28 EEEVVLGKRVQQWMKLQELRQTLQSEEGDRDPSDLEWAAAAGLSIEELRQQQHLGEQAKRKM-IEANLRLVVSVAKKYLK----RNMDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIRLPIHITEKLNKIKKMQRQLSQQLGRTATLPELAAALDLTPAQVRDYLEK-ARHPLSLDLRVG----------------------DNQDTELGDLLETDCTTPEEF-TLQASMRRDIDRLLDQLTEQ-QRQVIALRYGLEDGQVMTLASIGDRLQIS-RERVRQLEREALHTLRQA-----RSQVQEYLA 319          
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Match: Q10XF4_TRIEI (RNA polymerase, sigma 28 subunit n=20 Tax=Oscillatoriales TaxID=1150 RepID=Q10XF4_TRIEI)

HSP 1 Score: 130 bits (327), Expect = 1.320e-29
Identity = 100/312 (32.05%), Postives = 156/312 (50.00%), Query Frame = 0
Query:  129 EKEYELGTKIQAMMKLQKLKDTLRPASGEEAVNNEAWAKAAGETVESLRRALEEGANAKEEMAVLSNLSLVDIIVKNYVRCFSYGRFTETDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELALEAGLTVQQVEACLEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYGVDMLGPTAGEGLEPTPEGAK--VVQVSIREDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEETAEIMDFCDPDDVRIITTQAMKKLRE 438
            E+E   G ++Q +  LQ+   TL  A G E    E WA+A   +   L+R + EG  AK +M V +NL LV  + K Y++          DL Q+ T+G+ R VEKFDP +G+ FSTY  WW+R+ +   +    R +R+P     ++ K+K+++ +L  +LGR  T  E+A E GLT +Q+  CLE+    +  LD  +G                      D      G+ LE T    +   +Q S+R DL S  V L    +++ L LR+GL DG T ++ +    ++    + VR I  +A+ KLR+
Sbjct:   28 EEEILYGKQVQRLTALQEFNQTLAEALGREPTLLE-WAEAKELSKSELQRIIREGERAKRKM-VEANLRLVVSVAKKYIK----RNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKVQRQLTQQLGRSATTGEIAEELGLTPKQIRECLERARLPLS-LDLRVG----------------------DNQDTELGDLLEDTGASPEDYALQSSMRTDLESIMVDLTPQ-QKQVLALRFGLEDGQTMTLSKIGAHLNIS-RERVRQIEREALSKLRK 308          
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Match: UPI0019F950EB (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Oscillatoriales cyanobacterium LEGE 11467 TaxID=1828826 RepID=UPI0019F950EB)

HSP 1 Score: 129 bits (325), Expect = 2.380e-29
Identity = 102/310 (32.90%), Postives = 156/310 (50.32%), Query Frame = 0
Query:  129 EKEYELGTKIQAMMKLQKLKDTLRPASGEEAVNNEAWAKAAGETVESLRRALEEGANAKEEMAVLSNLSLVDIIVKNYVRCFSYGRFTETDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELALEAGLTVQQVEACLEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYGVDMLGPTAGEGLEPTPEGAKVVQVSIREDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEETAEIMDFCDPDDVRIITTQAMKKLRE 438
            E+E   G ++Q +  L  LK+ L  AS  E    E WA AA  + E L  A+ +G  AK +M V +NL LV  + K Y++          DL Q+ T+G+ R VEKFDP +G+ FSTY  WW+R+ +   +    R +R+P     ++ K+K+++ +L  ELGR  T  ELA E  LT +Q+         Y+ER  + +     + DN              D+L     E   P+PE    VQ S+R DL      L  + +RE L LR+GL DG + ++ +  +++     + VR I  +A+ KLR+
Sbjct:   27 EEEILFGKQVQRLASLNALKEELMEASDREPTPIE-WADAANISEEELELAIAKGDLAKRKM-VEANLRLVVSVAKKYLK----RNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKVQRQLTQELGRAATVAELASEMDLTTKQIRE-------YLERARQPLSLDLRVGDNQDTEL--------ADLL-----EDEGPSPEDF-AVQSSLRNDLEMLMADLT-SQQREVLALRFGLKDGQSMTLAKIGDLLQIS-RERVRQIEREALTKLRK 307          
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Match: K9Y6K9_HALP7 (RNA polymerase, sigma 70 subunit, RpoD subfamily n=5 Tax=Cyanobacteria TaxID=1117 RepID=K9Y6K9_HALP7)

HSP 1 Score: 129 bits (325), Expect = 2.950e-29
Identity = 103/309 (33.33%), Postives = 157/309 (50.81%), Query Frame = 0
Query:  129 EKEYELGTKIQAMMKLQKLKDTLRPASGEEAVNNEAWAKAAGETVESLRRALEEGANAKEEMAVLSNLSLVDIIVKNYVRCFSYGRFTETDLKQDATVGLIRAVEKFDPERGFLFSTYGRWWVRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELALEAGLTVQQVEACLEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYGVDMLGPTAGEGLEPTPEGAKVVQVSIREDLSSAFVRLLDATERECLVLRYGLHDGVTNSIEETAEIMDFCDPDDVRIITTQAMKKLR 437
            E+E  LG ++Q MMKL + K+ L    G EA + E W + AG + E L++A+ EG  AK +M + +NL LV  I K Y +          DL Q+ T+GL R VEKFDP RG+ FSTY  WW+R+ +   +    R +R+P     ++ K+K+++ EL  +LGR  T  E+A E GL   Q+         Y+    + +     + DN   ++  E              E  E +PE   + Q S+R+D+ S    L    +RE L LR+GL DG   S+ +  + ++    + VR +  QA+ KLR
Sbjct:   36 EQEIILGKQVQKMMKLIEQKEELEEELGREATDEE-WTQKAGISQEELQKAMREGNRAKRKM-IEANLRLVVAIAKKYQK----RNMEFLDLIQEGTLGLERGVEKFDPTRGYKFSTYAYWWIRQAITRAIAQQARAIRLPIHITEKLNKIKKVQRELAQKLGRNATPTEIAEELGLEPSQIRE-------YLSIARQPISLDVRVGDNQ-DTELSELL------------EDDENSPE-TYLTQESMRQDIDSMLSELTPQ-QREVLSLRFGLEDGNELSLAKVGKKLNLS-RERVRQLEHQALAKLR 315          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig906.18091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNH6_ECTSI2.060e-22658.12RNA polymerase sigma factor SigD n=2 Tax=Ectocarpu... [more]
UPI00194F09949.780e-3234.50RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
UPI0003460C223.530e-3133.54RNA polymerase sigma factor RpoD n=1 Tax=Oscillato... [more]
A0A7C9TSD1_9CYAN4.510e-3133.87RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
B8C5F0_THAPS5.980e-3133.23Sigma70_r2 domain-containing protein n=1 Tax=Thala... [more]
Q7NEW6_GLOVI5.230e-3032.73RNA polymerase sigma factor n=4 Tax=Gloeobacterale... [more]
SIGA3_SYNE77.350e-3031.40RNA polymerase sigma factor SigA3 n=5 Tax=Synechoc... [more]
Q10XF4_TRIEI1.320e-2932.05RNA polymerase, sigma 28 subunit n=20 Tax=Oscillat... [more]
UPI0019F950EB2.380e-2932.90RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
K9Y6K9_HALP72.950e-2933.33RNA polymerase, sigma 70 subunit, RpoD subfamily n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 549..569
NoneNo IPR availableCOILSCoilCoilcoord: 176..196
NoneNo IPR availableCOILSCoilCoilcoord: 717..745
NoneNo IPR availableCOILSCoilCoilcoord: 636..674
NoneNo IPR availableGENE3D1.20.120.1810coord: 96..263
e-value: 2.2E-22
score: 82.1
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 126..452
NoneNo IPR availablePANTHERPTHR30603:SF45RNA POLYMERASE SIGMA FACTOR SIGBcoord: 126..452
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..809
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 388..400
score: 36.43
coord: 425..436
score: 41.83
coord: 243..251
score: 60.79
coord: 219..232
score: 51.47
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 264..316
e-value: 6.9E-11
score: 44.0
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 370..459
e-value: 2.6E-6
score: 29.0
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 193..438
e-value: 4.9E-13
score: 47.0
IPR007624RNA polymerase sigma-70 region 3PFAMPF04539Sigma70_r3coord: 276..316
e-value: 1.8E-7
score: 31.1
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 219..253
e-value: 5.1E-7
score: 29.4
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 263..314
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 373..438
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 127..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig906contigL-elsbetiae_contig906:10592..19394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig906.18091.1mRNA_L-elsbetiae_contig906.18091.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig906 10422..19413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig906.18091.1 ID=prot_L-elsbetiae_contig906.18091.1|Name=mRNA_L-elsbetiae_contig906.18091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=810bp
MSRQPSMQHFVIRHFAVVRAWLLLGILGVWCVYLGGHVGVAAFAVPGRLQ
QQRLLSRRSCLSRSGLQSIKRRARCLTMDAEGAGAEGVAVPLPKTYSRKG
KWTVYNSVSPKKQRAPNRVLSKEAQAKREKEYELGTKIQAMMKLQKLKDT
LRPASGEEAVNNEAWAKAAGETVESLRRALEEGANAKEEMAVLSNLSLVD
IIVKNYVRCFSYGRFTETDLKQDATVGLIRAVEKFDPERGFLFSTYGRWW
VRKFLHEGVQNHDRMVRIPNSAAYRIAKVKRIRGELEMELGREPTRPELA
LEAGLTVQQVEACLEQDAFYIERLDKYMGYGFGIADNLFASQYGESFVYG
VDMLGPTAGEGLEPTPEGAKVVQVSIREDLSSAFVRLLDATERECLVLRY
GLHDGVTNSIEETAEIMDFCDPDDVRIITTQAMKKLREGCLPEERKKLMS
YLSVYEPKSTNYSKTKYDPAISKGKQDSSSSYASIRSSIDSIISSSSSSS
QTPGDSATDGETSIDTDRQGWAEDAGMEASAVAAGRSSNGEERLGVWEAT
TESQELVSAKQERRGAQEEGLGDGEENQERQVWEAGFSSDAAGDGDEQQR
RQQGRKLKVNSDDTGGASGRGRGEERELWDFSKHGQEELQQELTRYLRRH
RLAKKNAEKAAALAAENALAAEEKAAAGGGSTTNNGSAARRKKVTTPRRR
VSSSTRLGRYSRSAVDLARQQREERQQREEGRELEERAREEEEEEEWRRK
QAGRPIPVGNGAGSAVVGDLEPMPNSREADQLESLSRLLWDGQGEPEDFA
LSYGKQPEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR036388WH-like_DNA-bd_sf
IPR014284RNA_pol_sigma-70_dom
IPR007624RNA_pol_sigma70_r3
IPR007627RNA_pol_sigma70_r2
IPR013324RNA_pol_sigma_r3/r4-like
IPR013325RNA_pol_sigma_r2