prot_L-elsbetiae_contig906.18090.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig906.18090.1
Unique Name	prot_L-elsbetiae_contig906.18090.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	346

Homology

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BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Match: A0A6H5KQE7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE7_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.260e-60
Identity = 148/380 (38.95%), Postives = 186/380 (48.95%), Query Frame = 0

Query:   18 MILACVVLMVTTNRKFGHATFHN---------NRRAVVGDSTEGRRSTSSKNSNTHGRHLFEGLPELGVLETITSFLSPADLVGIATVSAEFCRASASSLLWRCHCERAFGASNPQLLLGGDWRRAEHERRDNRFQHQHKQ-----------------------------DGRY--------------SGRRGRLLQKQPGEDTAAVVVERRCGCDTSRSKRQHQCWPTTEGGGNGGKRASLASHFRRCCSEPVCPNYSWREAFFRAHRAKPRDLLRELSP-FPSSTST--PASHHAXXXXXXRPCIVILHGRVHDLTEFLQSHPGGSLILQEHAFTDATPAFERFFHSREARRIARKFVLWDGQAVMGRRGTLYWVAHQ 342
            MI++CV L++TTNR +G  TF +         + +     +       S + + T   ++F  +PE GVLE I SFLSPADLVG   VS  F R+S +  LW+ HC R F   +P   LGG            R Q Q                                 GR+              SGR G       G   A      R    T  ++R   C      G NG       S   R C +    +  WREAFFRAHRA+PRDLLRELS   PS+ +   P S  A      + CI++LHG V++L  FL SHPGG+LILQEHA TDAT AFERFFHSREARR+AR+FV+WDG+AVMGR+GTL+  A Q
Sbjct:    1 MIVSCVALVMTTNRMYGQPTFFSPQSGSSSSVDEKGCCASTNSSTSRASRERTATSTGNVFGRVPEFGVLEVILSFLSPADLVGTEAVSTTFRRSSIAEHLWKQHCARTF---SPLAQLGGA-----------RCQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGRFRPSKACCSSCCPISSGRGGYHEATDSGLPLACSTTTSRT---TGDARRSGSC------GRNGSNGPPSPSSLSRSCCDRAGYHCPWREAFFRAHRARPRDLLRELSSSLPSNVNIQQPPSQPAPE----QQCIIVLHGNVYELAGFLSSHPGGALILQEHASTDATEAFERFFHSREARRMARRFVVWDGEAVMGRKGTLWRFARQ 353

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BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Match: UPI0005F42FE9 (cytochrome b5-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F42FE9)

HSP 1 Score: 61.6 bits (148), Expect = 3.500e-8
Identity = 22/56 (39.29%), Postives = 44/56 (78.57%), Query Frame = 0

Query:  270 VILHGRVHDLTEFLQSHPGGSLILQEHAFTDATPAFERFFHSREARRIARKFVLWD 325
            ++++  V+D+T+++Q HPGGS +++EHA TDAT  F+ F HS +A+++ +K+++ +
Sbjct:   26 IVIYDNVYDVTDYMQQHPGGSELIEEHAGTDATNGFDDFGHSSDAKKMLKKYLIGE 81

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BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Match: A0A7L2IS49_9PICI (CYB5B protein (Fragment) n=1 Tax=Semnornis frantzii TaxID=91796 RepID=A0A7L2IS49_9PICI)

HSP 1 Score: 61.2 bits (147), Expect = 4.790e-8
Identity = 27/68 (39.71%), Postives = 44/68 (64.71%), Query Frame = 0

Query:  270 VILHGRVHDLTEFLQSHPGGSLILQEHAFTDATPAFERFFHSREARRIARKFVLWDGQAVMGRRGTLY 337
            +++HGRV+D+T FL+ HPGG  +L E A  DAT +FE   HS +AR + +++ + +   V    G+L+
Sbjct:   15 LVIHGRVYDVTRFLEEHPGGEEVLLEQAGRDATESFEDVGHSTDAREMLKQYYIGEVHPVRPSCGSLF 82

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BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Match: A0A7K5YR43_9AVES (CYB5B protein (Fragment) n=19 Tax=Neognathae TaxID=8825 RepID=A0A7K5YR43_9AVES)

HSP 1 Score: 60.1 bits (144), Expect = 8.230e-8
Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0

Query:  270 VILHGRVHDLTEFLQSHPGGSLILQEHAFTDATPAFERFFHSREARRIARKFVLWDGQAVMGRRGTLYW 338
            +++HGRV+D+T FL+ HPGG  ++ E A  DAT +FE   HS +AR + +++ + +   V  R   L+W
Sbjct:   15 LVIHGRVYDVTSFLEEHPGGEEVVLEQAGRDATESFEDVGHSTDAREMLKQYYIGEVHPV--RTSWLFW 81

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BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Match: A0A1U7USA0_CARSF (cytochrome b5 type B isoform X2 n=1 Tax=Carlito syrichta TaxID=1868482 RepID=A0A1U7USA0_CARSF)

HSP 1 Score: 60.5 bits (145), Expect = 1.280e-7
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0

Query:  270 VILHGRVHDLTEFLQSHPGGSLILQEHAFTDATPAFERFFHSREARRIARKFVLWD 325
            +++HGRV+D+T FL  HPGG  +LQE A  DA+ +FE   HS +AR + +++ + D
Sbjct:   39 LVIHGRVYDITRFLNEHPGGEEVLQEQAGADASESFEDVGHSTDAREMLKQYYIGD 94

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BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Match: A0A1U7UQS7_CARSF (cytochrome b5 type B isoform X1 n=1 Tax=Carlito syrichta TaxID=1868482 RepID=A0A1U7UQS7_CARSF)

HSP 1 Score: 60.5 bits (145), Expect = 1.420e-7
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0

Query:  270 VILHGRVHDLTEFLQSHPGGSLILQEHAFTDATPAFERFFHSREARRIARKFVLWD 325
            +++HGRV+D+T FL  HPGG  +LQE A  DA+ +FE   HS +AR + +++ + D
Sbjct:   39 LVIHGRVYDITRFLNEHPGGEEVLQEQAGADASESFEDVGHSTDAREMLKQYYIGD 94

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BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Match: A0A7L2E5N2_ANTMN (CYB5B protein (Fragment) n=1 Tax=Anthoscopus minutus TaxID=156561 RepID=A0A7L2E5N2_ANTMN)

HSP 1 Score: 59.7 bits (143), Expect = 1.430e-7
Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 0

Query:  270 VILHGRVHDLTEFLQSHPGGSLILQEHAFTDATPAFERFFHSREARRIARKFVLWDGQAV 329
            +++HGRV+D+T FL+ HPGG  +L E A  DAT +FE   HS +AR + +++ + D   V
Sbjct:   15 LVIHGRVYDVTRFLEEHPGGEEVLLEQAGRDATESFEDVGHSTDAREMLKQYYIGDVHPV 74

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BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Match: UPI00038BF69B (cytochrome b5 type B isoform X2 n=1 Tax=Ictidomys tridecemlineatus TaxID=43179 RepID=UPI00038BF69B)

HSP 1 Score: 60.1 bits (144), Expect = 1.470e-7
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0

Query:  270 VILHGRVHDLTEFLQSHPGGSLILQEHAFTDATPAFERFFHSREARRIARKFVLWD 325
            +++HGRV+D+T FL  HPGG  +L E A TD+T +FE   HS +AR + +++ + D
Sbjct:   39 LVIHGRVYDITRFLNEHPGGEEVLLEQAGTDSTESFEDVGHSSDAREMLKQYYIGD 94

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BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Match: A0A7K7LBV9_9AVES (CYB5B protein (Fragment) n=2 Tax=Anatinae TaxID=2068716 RepID=A0A7K7LBV9_9AVES)

HSP 1 Score: 59.7 bits (143), Expect = 1.530e-7
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 0

Query:  270 VILHGRVHDLTEFLQSHPGGSLILQEHAFTDATPAFERFFHSREARRIARKFVL---------WDGQAVMGRRGT 335
            +++HGRV+D+T FL+ HPGG  +L E A  DAT +FE   HS +AR + +++ +         W GQ    R G 
Sbjct:   15 LVIHGRVYDVTRFLEEHPGGEEVLLEQAGKDATESFEDVGHSTDAREMLKQYYIGEVHPVRPCWVGQPSQTRDGV 89

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BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Match: A0A7L3LA00_9CHAR (CYB5B protein (Fragment) n=1 Tax=Turnix velox TaxID=2529409 RepID=A0A7L3LA00_9CHAR)

HSP 1 Score: 58.2 bits (139), Expect = 1.840e-7
Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 0

Query:  270 VILHGRVHDLTEFLQSHPGGSLILQEHAFTDATPAFERFFHSREARRIARKFVLWDGQAVM 330
            +++HGRV+D+T FL+ HPGG  +L E A  DAT +FE   HS +AR + +++ + +   VM
Sbjct:   15 LVIHGRVYDVTRFLEEHPGGEEVLLEQAGKDATESFEDVGHSADARDMLQQYYVGEIHPVM 75

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig906.18090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KQE7_9PHAE	1.260e-60	38.95	Cytochrome b5 heme-binding domain-containing prote...	[more]
UPI0005F42FE9	3.500e-8	39.29	cytochrome b5-like n=1 Tax=Vollenhovia emeryi TaxI...	[more]
A0A7L2IS49_9PICI	4.790e-8	39.71	CYB5B protein (Fragment) n=1 Tax=Semnornis frantzi...	[more]
A0A7K5YR43_9AVES	8.230e-8	39.13	CYB5B protein (Fragment) n=19 Tax=Neognathae TaxID...	[more]
A0A1U7USA0_CARSF	1.280e-7	44.64	cytochrome b5 type B isoform X2 n=1 Tax=Carlito sy...	[more]
A0A1U7UQS7_CARSF	1.420e-7	44.64	cytochrome b5 type B isoform X1 n=1 Tax=Carlito sy...	[more]
A0A7L2E5N2_ANTMN	1.430e-7	43.33	CYB5B protein (Fragment) n=1 Tax=Anthoscopus minut...	[more]
UPI00038BF69B	1.470e-7	44.64	cytochrome b5 type B isoform X2 n=1 Tax=Ictidomys ...	[more]
A0A7K7LBV9_9AVES	1.530e-7	38.67	CYB5B protein (Fragment) n=2 Tax=Anatinae TaxID=20...	[more]
A0A7L3LA00_9CHAR	1.840e-7	42.62	CYB5B protein (Fragment) n=1 Tax=Turnix velox TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001199	Cytochrome b5-like heme/steroid binding domain	SMART	SM01117	Cyt_b5_2	coord: 249..322 e-value: 3.1E-4 score: 30.1
IPR001199	Cytochrome b5-like heme/steroid binding domain	PFAM	PF00173	Cyt-b5	coord: 264..319 e-value: 1.3E-10 score: 41.3
IPR001199	Cytochrome b5-like heme/steroid binding domain	PROSITE	PS50255	CYTOCHROME_B5_2	coord: 255..334 score: 16.212
None	No IPR available	GENE3D	1.20.1280.50		coord: 54..238 e-value: 9.4E-7 score: 30.7
None	No IPR available	PANTHER	PTHR19359:SF41	YTOCHROME B	coord: 262..322
None	No IPR available	PANTHER	PTHR19359	CYTOCHROME B5	coord: 262..322
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 30..345
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	TMHMM	TMhelix		coord: 10..27
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	GENE3D	3.10.120.10		coord: 251..328 e-value: 1.4E-14 score: 55.6
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	SUPERFAMILY	55856	Cytochrome b5-like heme/steroid binding domain	coord: 265..322
IPR018506	Cytochrome b5, heme-binding site	PROSITE	PS00191	CYTOCHROME_B5_1	coord: 282..289
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 55..234

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig906	contig	L-elsbetiae_contig906:8632..10075 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig906.18090.1	mRNA_L-elsbetiae_contig906.18090.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig906 8266..10294 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig906.18090.1 ID=prot_L-elsbetiae_contig906.18090.1|Name=mRNA_L-elsbetiae_contig906.18090.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=346bp
MSVQPAEPDGLPVLAAGMILACVVLMVTTNRKFGHATFHNNRRAVVGDST
EGRRSTSSKNSNTHGRHLFEGLPELGVLETITSFLSPADLVGIATVSAEF
CRASASSLLWRCHCERAFGASNPQLLLGGDWRRAEHERRDNRFQHQHKQD
GRYSGRRGRLLQKQPGEDTAAVVVERRCGCDTSRSKRQHQCWPTTEGGGN
GGKRASLASHFRRCCSEPVCPNYSWREAFFRAHRAKPRDLLRELSPFPSS
TSTPASHHAQQPPPPRPCIVILHGRVHDLTEFLQSHPGGSLILQEHAFTD
ATPAFERFFHSREARRIARKFVLWDGQAVMGRRGTLYWVAHQPSP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001199	Cyt_B5-like_heme/steroid-bd
IPR036400	Cyt_B5-like_heme/steroid_sf
IPR018506	Cyt_B5_heme-BS
IPR036047	F-box-like_dom_sf