prot_L-elsbetiae_contig9051.18082.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9051.18082.1
Unique Nameprot_L-elsbetiae_contig9051.18082.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length285
Homology
BLAST of mRNA_L-elsbetiae_contig9051.18082.1 vs. uniprot
Match: A0A6H5JHV6_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV6_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 3.930e-57
Identity = 144/288 (50.00%), Postives = 155/288 (53.82%), Query Frame = 0
Query:    1 VGSTKADRGTRRPEWNQNFLIRSDLTEPAS--PKQDQHEDQQGKDGXXXXXXSNLGDGYGCHQDGGAGGGSIQCVCSAALNVQTDGSDGAEDSAYQGSGRCEACRQRGRGLDEVVLEVWDQYIRDDEKAELQAKDGSDKKMRRRSSTSKPNDLYDDRLFDVSFVSRCFQKGALRRVQGVVIGGDRLIGVCHISSSELRALGSSTVPADLKLRDPRGSWWSSSRGTIRVAVSLERLQANIIRAALPPNKAPV-GVPLGAGVGAGGVARAAVQEAKGEEVLPPAELSCKV 285
            VG TKADRGTRRPEWNQNFLIRSDL EPA+  P++D         G      SN  D Y     G       +C CSA       G  G+ D        CEA  +RG G+DEVVLE+WD+Y                                                       G VIGGDRLIGVC ISSSELR LGSSTVPADLKLRDPRG WW SSRGTIR+AVSLERLQANIIRAALPPN+A V GVP G       V R A  EAKGEE  PP ELSCKV
Sbjct:   65 VGCTKADRGTRRPEWNQNFLIRSDLAEPATALPRRDV--------GDVGDDMSNPDDDYRQEPQGERN----RCSCSAEAAT---GEGGSAD--------CEAEWRRG-GVDEVVLELWDEY-------------------------------------------------------GAVIGGDRLIGVCRISSSELRRLGSSTVPADLKLRDPRGLWWGSSRGTIRIAVSLERLQANIIRAALPPNRASVLGVPEG-------VTRTASGEAKGEETAPPTELSCKV 266          
BLAST of mRNA_L-elsbetiae_contig9051.18082.1 vs. uniprot
Match: D7FSM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM2_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 3.590e-47
Identity = 94/118 (79.66%), Postives = 96/118 (81.36%), Query Frame = 0
Query:  169 GALRRVQGVVIGGDRLIGVCHISSSELRALGSSTVPADLKLRDPRGSWWSSSRGTIRVAVSLERLQANIIRAALPPNKAPV-GVPLGAGVGAGGVARAAVQEAKGEEVLPPAELSCKV 285
            GALRRVQG VIGGDRLIGVC ISSSELR LGSSTVPADLKLRDPRGSWW SSRGTIR+AVSLERLQANIIRAALPP +A V GVP G       V R A  EAKGEE  PP ELSCKV
Sbjct:   26 GALRRVQGAVIGGDRLIGVCRISSSELRGLGSSTVPADLKLRDPRGSWWGSSRGTIRIAVSLERLQANIIRAALPPKRASVLGVPEG-------VTRTASSEAKGEEAAPPTELSCKV 136          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9051.18082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHV6_9PHAE3.930e-5750.00C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FSM2_ECTSI3.590e-4779.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9051contigL-elsbetiae_contig9051:4867..7416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9051.18082.1mRNA_L-elsbetiae_contig9051.18082.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9051 4866..7416 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9051.18082.1 ID=prot_L-elsbetiae_contig9051.18082.1|Name=mRNA_L-elsbetiae_contig9051.18082.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=285bp
VGSTKADRGTRRPEWNQNFLIRSDLTEPASPKQDQHEDQQGKDGDGDGDS
SNLGDGYGCHQDGGAGGGSIQCVCSAALNVQTDGSDGAEDSAYQGSGRCE
ACRQRGRGLDEVVLEVWDQYIRDDEKAELQAKDGSDKKMRRRSSTSKPND
LYDDRLFDVSFVSRCFQKGALRRVQGVVIGGDRLIGVCHISSSELRALGS
STVPADLKLRDPRGSWWSSSRGTIRVAVSLERLQANIIRAALPPNKAPVG
VPLGAGVGAGGVARAAVQEAKGEEVLPPAELSCKV
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