prot_L-elsbetiae_contig905.18080.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig905.18080.1
Unique Nameprot_L-elsbetiae_contig905.18080.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length79
Homology
BLAST of mRNA_L-elsbetiae_contig905.18080.1 vs. uniprot
Match: A0A6H5KW71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW71_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.490e-9
Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    1 MPSTCSHRGCTKFPSLGVAGTRKREFCRGHAKDGMVDLTNR 41
            MP+ C H GC K P  GVAGT+KREFC GH K GMVD+ NR
Sbjct:    1 MPA-CGHAGCPKQPKYGVAGTKKREFCSGHRKAGMVDVVNR 40          
BLAST of mRNA_L-elsbetiae_contig905.18080.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 7.130e-9
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    3 STCSHRGCTKFPSLGVAGTRKREFCRGHAKDGMVDLTNRK 42
            S C H  CTK P+ GVAG++KREFC  HA+DGMV++ N++
Sbjct:   62 SQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKR 101          
BLAST of mRNA_L-elsbetiae_contig905.18080.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 9.080e-9
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    3 STCSHRGCTKFPSLGVAGTRKREFCRGHAKDGMVDLTNRK 42
            S C H  CTK P+ GVAG++KREFC  HA+DGMV++ N++
Sbjct:    2 SQCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKR 41          
BLAST of mRNA_L-elsbetiae_contig905.18080.1 vs. uniprot
Match: D8LFX6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX6_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 4.130e-5
Identity = 22/42 (52.38%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    1 MPSTCSHRGCTKFPSLGVA-GTRKREFCRGHAKDGMVDLTNR 41
            MPS C+  GC   PS G+  G RK  FCRGHAK+GM+++ +R
Sbjct:    1 MPSKCASPGCPTNPSFGLNDGKRKVLFCRGHAKEGMINVRDR 42          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig905.18080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KW71_9PHAE1.490e-965.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT00_9PHAE7.130e-957.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI73_ECTSI9.080e-957.50EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LFX6_ECTSI4.130e-552.38EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig905contigL-elsbetiae_contig905:18260..18496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig905.18080.1mRNA_L-elsbetiae_contig905.18080.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig905 18064..18496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig905.18080.1 ID=prot_L-elsbetiae_contig905.18080.1|Name=mRNA_L-elsbetiae_contig905.18080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=79bp
MPSTCSHRGCTKFPSLGVAGTRKREFCRGHAKDGMVDLTNRKCVHQGCTK
GPSFGVAGTKKREFCRVHANDGMVDLNNN
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