prot_L-elsbetiae_contig9047.18077.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9047.18077.1
Unique Nameprot_L-elsbetiae_contig9047.18077.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length146
Homology
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BLAST of mRNA_L-elsbetiae_contig9047.18077.1 vs. uniprot
Match: A0A6H5LCQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ2_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 5.030e-33
Identity = 69/132 (52.27%), Postives = 97/132 (73.48%), Query Frame = 0 
Query:    1 MVLLLDDDRLQLSTVVLLALQVTVMVCGFLTVRMWIYTNDRRMMQGSPTIIKITRFLEKTAGQRICYLLLSAGPVIGVALVLADCTETAIRIVGATFILLIIFADVMFWVFGSSLLRAIEISLINTRRSSVD 132
            +VLL++    ++S +V++  Q+TV VCGF TVRMWIYTND R+MQGS TI++I+  LEK  GQR+ YL+LS GPV+   L L   TE A ++V  TFI+LI+ AD  FW+FG +LLRAI+ SL N+R+ +++
Sbjct:   18 LVLLVEARWHEISVLVMILNQITVSVCGFSTVRMWIYTNDTRLMQGSITILRISAALEKKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVVADTSFWIFGRALLRAIDASLQNSRKRAME 149
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BLAST of mRNA_L-elsbetiae_contig9047.18077.1 vs. uniprot
Match: D7G622_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G622_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 4.570e-32
Identity = 67/127 (52.76%), Postives = 92/127 (72.44%), Query Frame = 0 
Query:    1 MVLLLDDDRLQLSTVVLLALQVTVMVCGFLTVRMWIYTNDRRMMQGSPTIIKITRFLEKTAGQRICYLLLSAGPVIGVALVLADCTETAIRIVGATFILLIIFADVMFWVFGSSLLRAIEISLINTR 127
            +VLL+     ++S +V++  Q+TV VCGFLTVRMWIYTND R+MQ S T+++I+  LE+  GQR+ YL+LS GPV+   L L   TE A ++V  TFI+LI+F D  FW+FG +LLRAI+ SL N+R
Sbjct:   18 LVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDARLMQASSTMLRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVFTDTTFWIFGRALLRAIDASLQNSR 144
[Close]
BLAST of mRNA_L-elsbetiae_contig9047.18077.1 vs. uniprot
Match: D8LCB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB1_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 6.400e-14
Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 0 
Query:    1 MVLLLDDDRLQLSTVVLLALQVTVM-VCGFLTVRMWIYTNDRRMMQGSPTIIKITRFLEKTAGQRICYLLLSAGPVIGVALVLADCTETAIRIVGATFILLIIFADVMFWVFGSSLLRAIEISLINT 126
            MVLLLD +RL +ST+ +L+   T+M + G LTVRMWIY ND R+ + +P I+ I+  LE+  G  +   ++  GP I   L +A   + A ++    F+ LI+F D +    G++LLR +   L NT
Sbjct:  115 MVLLLDSERLWMSTIFMLSAGQTMMTIGGILTVRMWIYCNDPRLTRETPEILAISEALERPTGCFVSNTVMCVGPAIATVLAVAKSLQAAGKVSAVAFLGLIVFCDFIILKSGTALLRTVNKYLRNT 241
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9047.18077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LCQ2_9PHAE5.030e-3352.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G622_ECTSI4.570e-3252.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCB1_ECTSI6.400e-1438.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 84..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 65..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9047contigL-elsbetiae_contig9047:3523..4690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9047.18077.1mRNA_L-elsbetiae_contig9047.18077.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9047 3523..4695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9047.18077.1 ID=prot_L-elsbetiae_contig9047.18077.1|Name=mRNA_L-elsbetiae_contig9047.18077.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp
MVLLLDDDRLQLSTVVLLALQVTVMVCGFLTVRMWIYTNDRRMMQGSPTI
IKITRFLEKTAGQRICYLLLSAGPVIGVALVLADCTETAIRIVGATFILL
IIFADVMFWVFGSSLLRAIEISLINTRRSSVDASMWTASVTASVRA
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