prot_L-elsbetiae_contig9044.18074.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9044.18074.1
Unique Nameprot_L-elsbetiae_contig9044.18074.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length248
Homology
BLAST of mRNA_L-elsbetiae_contig9044.18074.1 vs. uniprot
Match: D7FVH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH8_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 5.330e-103
Identity = 186/249 (74.70%), Postives = 204/249 (81.93%), Query Frame = 0
Query:    1 RNSFGPSYLFANVRTSLGKALTAFLKGGAAGSTG---VKGLDPGGGGLEEGEAQLCSEVQDDGSSEWGGFGGKLAMPSAEISTPVGATLQAPEEPRGMFEDVPNNQVAMTVYAMPPKGDHVCRMLPGVEALPRTLLPQDLVRRAPPRLNRNMSIAEMGSSKYDPRQQQQHGGQHQGGYGAGQRMIRHQLGGSGSXXXXXXXXXXXXXXXXXXXXXXXXQNQGGYEDRHHMHQQTGNRRWGSQEPTPKRN 246
            RNSFGPSYLF NVRTSLGKA++AF+K GA G  G   VKGLD  G GLE+GE +LC+EVQ+DGS+EWGGFGGKLA+P+ EIST VG TLQAPE+PRGMFEDV NNQV M VYAMPPKG+HVCRMLPGV+ALP+TLLPQDLV R PPRLNRNMSIAEMGS+KY+P QQQ  GG+HQGG+GAGQRMIRHQLG    XXX         XXXXXXXXXXXX       D HHMHQ TGNRRWGSQEPTPKRN
Sbjct:    5 RNSFGPSYLFTNVRTSLGKAVSAFVKEGAGGKAGGVEVKGLDSKGEGLEDGETRLCTEVQEDGSTEWGGFGGKLALPAPEISTAVGETLQAPEKPRGMFEDVANNQVVMAVYAMPPKGEHVCRMLPGVDALPKTLLPQDLVSRRPPRLNRNMSIAEMGSTKYNPHQQQ--GGRHQGGFGAGQRMIRHQLGXXXXXXXYHGQSQGYGXXXXXXXXXXXXXXX--XXDMHHMHQPTGNRRWGSQEPTPKRN 249          
BLAST of mRNA_L-elsbetiae_contig9044.18074.1 vs. uniprot
Match: A0A6H5JF35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF35_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 3.310e-100
Identity = 183/249 (73.49%), Postives = 201/249 (80.72%), Query Frame = 0
Query:    1 RNSFGPSYLFANVRTSLGKALTAFLKGGAAGSTG---VKGLDPGGGGLEEGEAQLCSEVQDDGSSEWGGFGGKLAMPSAEISTPVGATLQAPEEPRGMFEDVPNNQVAMTVYAMPPKGDHVCRMLPGVEALPRTLLPQDLVRRAPPRLNRNMSIAEMGSSKYDPRQQQQHGGQHQGGYGAGQRMIRHQLGGSGSXXXXXXXXXXXXXXXXXXXXXXXXQNQGGYEDRHHMHQQTGNRRWGSQEPTPKRN 246
            RNSFGPSYLFANVRT LGKA++AF+K GA G+ G   VKGLD    GLE GEA+LC+EVQ+DGS+EWGGFGGKLA+P+ EIST VG TLQAPE+PRGMFEDV NNQVAM VYAMPPKG+HVCRMLPGVEALP+TLLPQDLV R PPRLNRNMSIAEMGS+KY+P QQQ  GG+HQGG+GAGQRMIRHQLGG   XX                XXXX     GGYED HHMHQ TG+RRWGSQEPTPKRN
Sbjct:  880 RNSFGPSYLFANVRTPLGKAVSAFVKEGAGGTAGGVEVKGLDSKAEGLEAGEARLCTEVQEDGSTEWGGFGGKLAIPNPEISTAVGDTLQAPEKPRGMFEDVANNQVAMAVYAMPPKGEHVCRMLPGVEALPKTLLPQDLVSRRPPRLNRNMSIAEMGSTKYNPHQQQ--GGRHQGGFGAGQRMIRHQLGGXXXXXYHGQSQGYGYQQGGRSXXXXY---HGGYEDMHHMHQPTGSRRWGSQEPTPKRN 1123          
BLAST of mRNA_L-elsbetiae_contig9044.18074.1 vs. uniprot
Match: A0A835YKU1_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKU1_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.670e-17
Identity = 61/156 (39.10%), Postives = 77/156 (49.36%), Query Frame = 0
Query:    1 RNSFGPSYLFANVRTSLGKALTAFLKGGAAGSTGVKGLDPGGGGLEEGEAQLCSEVQDDGSSEWGGFGGKLAMPSAEISTPVGATLQAPEEPRGMFEDVPNNQVAMTVYAMPPKGDHVCRMLPGVEALPRTLLPQDLVRRAPPRLNRNMSIAEMGS 156
            RNSFGPSY+F +  + L + +    + G     G K          +G+    SE +       G  G       A+    +G  L APE P G  E V NNQV    Y MPP+  HVC MLPGV+     L P+DL  R PPRLNR MSIAE+G+
Sbjct: 1598 RNSFGPSYIFVHSTSHLSQRIMGVYQAG----NGKK---------SKGDFLRASEFE-------GWSGTVKPAKGADARQQLGKPLPAPERPEGALEGVKNNQVLCAEYEMPPRMPHVCAMLPGVDPPAIELGPEDLTPRRPPRLNRGMSIAELGT 1733          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9044.18074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVH8_ECTSI5.330e-10374.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF35_9PHAE3.310e-10073.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKU1_9STRA1.670e-1739.10XRN 5'-3' exonuclease N-terminus-domain-containing... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9044contigL-elsbetiae_contig9044:365..5328 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9044.18074.1mRNA_L-elsbetiae_contig9044.18074.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9044 365..5328 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9044.18074.1 ID=prot_L-elsbetiae_contig9044.18074.1|Name=mRNA_L-elsbetiae_contig9044.18074.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=248bp
RNSFGPSYLFANVRTSLGKALTAFLKGGAAGSTGVKGLDPGGGGLEEGEA
QLCSEVQDDGSSEWGGFGGKLAMPSAEISTPVGATLQAPEEPRGMFEDVP
NNQVAMTVYAMPPKGDHVCRMLPGVEALPRTLLPQDLVRRAPPRLNRNMS
IAEMGSSKYDPRQQQQHGGQHQGGYGAGQRMIRHQLGGSGSGGGGYHGGQ
SQGYSHSQGGYQGGYQNQGGYEDRHHMHQQTGNRRWGSQEPTPKRNG*
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