prot_L-elsbetiae_contig904.18067.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig904.18067.1
Unique Nameprot_L-elsbetiae_contig904.18067.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length467
Homology
BLAST of mRNA_L-elsbetiae_contig904.18067.1 vs. uniprot
Match: D7FRJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRJ6_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 3.970e-77
Identity = 165/358 (46.09%), Postives = 180/358 (50.28%), Query Frame = 0
Query:  109 RERLTALYNQKALRYGIVFDELVRQVAVHSMGLATLVGKAFAGHHTLLTRLIRTHDAREVELQTLQVQLAGLTGESNRKMNEEDALIEEQAFMENLTKAELRESRALCSSLRTKLKYYGDEIARLRQIVLDKVEDEEDEQRHTKVHNSLTTDGVSMPVIAKGNRAIPLSRKPLRKQPTEESPADVDGVVTILEISTEKVKMHSKHEQELNKMLSQLSTESSKQTNDVNSLGKLIDGANFLTFLKGISKEGRKAMRRHQQTQTRPMRETKADSRPGTGTGTGGRKRPPKKTKGSKTETLPLDLRNSIGMASAPKKIPTLGYMLRTVLDMMLVWSRSLETATSLCKKPGGMTEIAIKHFQ 466
            RE LT LYN+KALRYGIVFDEL+RQVAVHSM LATLVGKAF GHH LLTRLI+ HDARE +LQ LQ                                                                                                                                                               D+N+L KLIDG +F+ FLKGI+KEGRKAMRR ++TQTRP R+ K+DSRPGTGTG  G+KRPPKKTKGSKTE LPLDLRNSIGMASAPKKIPTLGYMLRTVLDMMLVWSRSL+T  SLCKKPGGMTEIAIKHFQ
Sbjct:   21 RESLTHLYNEKALRYGIVFDELIRQVAVHSMALATLVGKAFTGHHALLTRLIKVHDAREGQLQKLQ---------------------------------------------------------------------------------------------------------------------------------------------------------------DLNALAKLIDGVHFINFLKGINKEGRKAMRRTKETQTRPTRDKKSDSRPGTGTG--GKKRPPKKTKGSKTEILPLDLRNSIGMASAPKKIPTLGYMLRTVLDMMLVWSRSLDTPESLCKKPGGMTEIAIKHFQ 217          
BLAST of mRNA_L-elsbetiae_contig904.18067.1 vs. uniprot
Match: A0A6H5KXR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR9_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 7.380e-52
Identity = 97/111 (87.39%), Postives = 105/111 (94.59%), Query Frame = 0
Query:  356 KEGRKAMRRHQQTQTRPMRETKADSRPGTGTGTGGRKRPPKKTKGSKTETLPLDLRNSIGMASAPKKIPTLGYMLRTVLDMMLVWSRSLETATSLCKKPGGMTEIAIKHFQ 466
            +EGRKAMRR ++TQTRPMR+ K+DSRPGTGTG  G+KRPPKKTKGSKTE LPLDLRNSIGMASAPKKIPTLGYMLRTVLDMMLVWSRSL+TA SLC+KPGGMTEIAIKHFQ
Sbjct:    7 REGRKAMRRTKETQTRPMRDKKSDSRPGTGTG--GKKRPPKKTKGSKTEILPLDLRNSIGMASAPKKIPTLGYMLRTVLDMMLVWSRSLDTAESLCQKPGGMTEIAIKHFQ 115          
BLAST of mRNA_L-elsbetiae_contig904.18067.1 vs. uniprot
Match: A0A6H5KW65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW65_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 4.730e-27
Identity = 60/81 (74.07%), Postives = 64/81 (79.01%), Query Frame = 0
Query:   95 PRSLHQSPKKTAQDRERLTALYNQKALRYGIVFDELVRQVAVHSMGLATLVGKAFAGHHTLLTRLIRTHDAREVELQTLQV 175
            PR  H S K     RE LT LYN+KALRYGIVFDEL+RQVAVHSM LATLVGKAF GHH LLTRLI+ HDARE +LQ LQV
Sbjct:   16 PRVSHPSGKDLESKRESLTHLYNEKALRYGIVFDELIRQVAVHSMALATLVGKAFTGHHALLTRLIKVHDAREGQLQKLQV 96          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig904.18067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FRJ6_ECTSI3.970e-7746.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXR9_9PHAE7.380e-5287.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW65_9PHAE4.730e-2774.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig904contigL-elsbetiae_contig904:15080..21027 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig904.18067.1mRNA_L-elsbetiae_contig904.18067.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig904 15080..21028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig904.18067.1 ID=prot_L-elsbetiae_contig904.18067.1|Name=mRNA_L-elsbetiae_contig904.18067.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=467bp
GFQDKRVPVPEDGGASLAVDAFLHRNQAPPDCPYGEDDVDDDEEARQLAR
RPSPHGVFHAHAHDMAYLEEWIGEMLNITRGVDGGKGDGARDGPPRSLHQ
SPKKTAQDRERLTALYNQKALRYGIVFDELVRQVAVHSMGLATLVGKAFA
GHHTLLTRLIRTHDAREVELQTLQVQLAGLTGESNRKMNEEDALIEEQAF
MENLTKAELRESRALCSSLRTKLKYYGDEIARLRQIVLDKVEDEEDEQRH
TKVHNSLTTDGVSMPVIAKGNRAIPLSRKPLRKQPTEESPADVDGVVTIL
EISTEKVKMHSKHEQELNKMLSQLSTESSKQTNDVNSLGKLIDGANFLTF
LKGISKEGRKAMRRHQQTQTRPMRETKADSRPGTGTGTGGRKRPPKKTKG
SKTETLPLDLRNSIGMASAPKKIPTLGYMLRTVLDMMLVWSRSLETATSL
CKKPGGMTEIAIKHFQA
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