prot_L-elsbetiae_contig887.17894.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig887.17894.1
Unique Name	prot_L-elsbetiae_contig887.17894.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	332

Homology

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BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Match: D7G7E8_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E8_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.290e-35
Identity = 67/85 (78.82%), Postives = 72/85 (84.71%), Query Frame = 0

Query:  198 GVVRGLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHGGLMASAFGALTNEIWTSKKASLRPGDFKAQGG 282
            GV     GLQNLGNTCFMNSALQCL NCEALADYFLGF+WK EIN+GNFLGH GLMASAFG+L N++W S KASLRPGDFK Q G
Sbjct:   18 GVACFAAGLQNLGNTCFMNSALQCLFNCEALADYFLGFDWKREINRGNFLGHKGLMASAFGSLANDMWRSDKASLRPGDFKTQVG 102

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BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Match: A0A835YTE2_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTE2_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.120e-19
Identity = 51/117 (43.59%), Postives = 66/117 (56.41%), Query Frame = 0

Query:  181 STYGELKVLVETKKLGGGVVRGLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHGGLMASAFGALTNEIW------------------TSKKASLRPGDFKA 279
            S Y E+  LV ++  G    RGL+GL N+GNTCFMN+ALQCL NC  L DYFL ++++ EIN  N  GHGG +A A+G L N +W                   +   +L P DFKA
Sbjct:    1 SNYDEVHELVLSRLSGPQYHRGLLGLTNMGNTCFMNTALQCLSNCVPLTDYFLAYDFRKEINASNRRGHGGAVAEAYGQLVNTLWGLGGEDGGSAGXXXGAPAVAAVTTLTPSDFKA 117

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BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Match: A0A7S4REU9_9STRA (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4REU9_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 3.720e-19
Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0

Query:  202 GLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHGGLMASAFGALTNEIWTSKKASLRPGDFKA 279
            G+VGLQNLGNTCFMNS+LQCL +   L DYFLG++++ EIN  NFLG  G +A+A+  L  E+W SKK SL P  FKA
Sbjct:  130 GVVGLQNLGNTCFMNSSLQCLSHTIPLTDYFLGYDYRKEINHENFLGTKGELANAYAVLMKEMWLSKKKSLAPSSFKA 207

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BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Match: A0A7R9WIF9_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WIF9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.070e-18
Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 0

Query:  169 SGRLSIRMSRQPSTYGELKVLVETKKLGGGVVR---GLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHGGLMASAFGALTNEIWTSKKASLRPGDFKA 279
            SGR  + +SR  STY  +  +V T   G  V++   GLVGL+NLGNTCF+NS+LQCL N   L DYFLG+N++ EIN  NFLG  G + +A+ AL   +W     S+ P  FK+
Sbjct:  138 SGRTHLAVSRA-STYDHVHNVVLTTFEGQDVLKRRAGLVGLRNLGNTCFLNSSLQCLSNTIPLTDYFLGYNYRKEINYTNFLGSKGELVTAYAALVKNLWMGDNKSIDPSIFKS 250

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BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Match: A0A448ZB53_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZB53_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.130e-18
Identity = 49/107 (45.79%), Postives = 67/107 (62.62%), Query Frame = 0

Query:  181 STYGELKVLV-------ETKKLGGGVVRGLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHGGLMASAFGALTNEIWTSKKASLRPGDFKAQ 280
            STY  +  +V       E  K    V  G++GL+NLGNTCF+NS+LQCL     L DYFLG++++ EINK NFLG GG + +A+  LT ++W   K+ + P DFK Q
Sbjct:  112 STYSHVHDIVMYNLSEAEISKHDQNVPMGVIGLKNLGNTCFLNSSLQCLSATIPLTDYFLGYDYRSEINKKNFLGTGGKLVTAYAELTKQLWLGSKSVVEPIDFKKQ 218

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BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Match: A0A1E7FE03_9STRA (Cysteine proteinase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE03_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.160e-18
Identity = 41/79 (51.90%), Postives = 58/79 (73.42%), Query Frame = 0

Query:  202 GLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHGGLMASAFGALTNEIWTSKKASLRPGDFKAQ 280
            G++GL+NLGNTCF+NS+LQCL     L DYFLG++++ EINK NFLG GG +++A+  LT ++W   K+ + P  FK Q
Sbjct:    1 GVIGLRNLGNTCFLNSSLQCLSATIPLTDYFLGYDYRSEINKKNFLGTGGRLSTAYAELTKQMWLGSKSVVEPISFKKQ 79

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BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Match: A0A177U6Y4_9BASI (Uncharacterized protein (Fragment) n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U6Y4_9BASI)

HSP 1 Score: 94.7 bits (234), Expect = 1.090e-17
Identity = 45/81 (55.56%), Postives = 55/81 (67.90%), Query Frame = 0

Query:  198 GVVRGLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHGGLMASAFGALTNEIWTSKKASLRPGDFK 278
            G  +GLVGLQNLGNTCFMNSALQCL N + L  YF    +  E+N  N LG GG +A AFGAL N++W   + S+ P +FK
Sbjct:  546 GRAKGLVGLQNLGNTCFMNSALQCLSNTKELQQYFSSGAYSSELNPDNPLGQGGALAQAFGALLNKLWDGNQTSIAPREFK 626

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BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Match: A0A177U6J4_9BASI (Uncharacterized protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U6J4_9BASI)

HSP 1 Score: 94.4 bits (233), Expect = 1.670e-17
Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 0

Query:  201 RGLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHGGLMASAFGALTNEIWTSKKASLRPGDFK 278
            +GLVGLQNLGNTCFMNSALQCL N + L  YF    ++ E+N  N LG GG +A AFGAL N++W   + S+ P +FK
Sbjct:  539 KGLVGLQNLGNTCFMNSALQCLSNTKELQQYFSSGAYQSELNTDNPLGQGGALAQAFGALLNKLWDGNQTSIAPREFK 616

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BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Match: A0A1Y2EHB1_9BASI (Uncharacterized protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2EHB1_9BASI)

HSP 1 Score: 93.6 bits (231), Expect = 2.960e-17
Identity = 49/96 (51.04%), Postives = 63/96 (65.62%), Query Frame = 0

Query:  184 GELKVLVETKKLGG-GVVRGLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHGGLMASAFGALTNEIWTSKKASLRPGDFK 278
            G    L  +K +GG G  RGL GLQNLGNTCFMNSALQC+ N + L +YF+   +K E+N+ N LG  G +A AFG L   IW+S  +S+ P +FK
Sbjct:  361 GLFGALTRSKGMGGSGRQRGLTGLQNLGNTCFMNSALQCMSNTKELQEYFVSGVYKDELNRDNPLGMRGQVAEAFGQLIERIWSSSGSSVAPREFK 456

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BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Match: UPI0009F2A254 (ubiquitin carboxyl-terminal hydrolase 8-like isoform X1 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F2A254)

HSP 1 Score: 92.0 bits (227), Expect = 8.040e-17
Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 0

Query:  176 MSRQPSTYGELKVLVETKKLGGGVVRGLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHGGLMASAFGALTNEIWTSKKASLRPGDFKAQ 280
            +S   +T  E  +   T K  G V  GL+GL+NLGNTCFMNSA+QCL + + L +YFLG ++  EIN  N LG GG +A AFG L  ++W   K  + P DFKA+
Sbjct:  247 LSNGSTTRAEYDLCFGTSK--GSVSFGLIGLENLGNTCFMNSAVQCLAHTQRLVEYFLG-DYSREINYQNSLGMGGELALAFGELLRKLWAPNKTPIAPRDFKAK 348

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig887.17894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7E8_ECTSI	1.290e-35	78.82	USP domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A835YTE2_9STRA	1.120e-19	43.59	USP domain-containing protein (Fragment) n=1 Tax=T...	[more]
A0A7S4REU9_9STRA	3.720e-19	60.26	Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Dity...	[more]
A0A7R9WIF9_9STRA	1.070e-18	47.37	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pseu...	[more]
A0A448ZB53_9STRA	1.130e-18	45.79	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pseu...	[more]
A0A1E7FE03_9STRA	5.160e-18	51.90	Cysteine proteinase (Fragment) n=1 Tax=Fragilariop...	[more]
A0A177U6Y4_9BASI	1.090e-17	55.56	Uncharacterized protein (Fragment) n=2 Tax=Tilleti...	[more]
A0A177U6J4_9BASI	1.670e-17	56.41	Uncharacterized protein n=2 Tax=Tilletia TaxID=132...	[more]
A0A1Y2EHB1_9BASI	2.960e-17	51.04	Uncharacterized protein n=1 Tax=Leucosporidium cre...	[more]
UPI0009F2A254	8.040e-17	47.62	ubiquitin carboxyl-terminal hydrolase 8-like isofo...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 204..279 e-value: 4.9E-14 score: 52.5
None	No IPR available	GENE3D	3.90.70.10		coord: 198..288 e-value: 3.9E-23 score: 84.0
None	No IPR available	PANTHER	PTHR21646	FAMILY NOT NAMED	coord: 63..283
None	No IPR available	PANTHER	PTHR21646:SF24	FI20021P1	coord: 63..283
IPR018200	Ubiquitin specific protease, conserved site	PROSITE	PS00972	USP_1	coord: 205..220
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 200..279

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig887	contig	L-elsbetiae_contig887:17319..21037 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig887.17894.1	mRNA_L-elsbetiae_contig887.17894.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig887 17246..21077 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig887.17894.1 ID=prot_L-elsbetiae_contig887.17894.1|Name=mRNA_L-elsbetiae_contig887.17894.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=332bp
MGTSSSSLARTKRRASKNSTESVGRHGESIRGSRASTGANGSSSRRGSLS
PPRDHYSSRSSSSSRGVGSSGSGRAKFSLFKKAPPRHQGELPSLPGGAAS
VTGGGASIGPTPPTGSGSGSSEESSEALSRADSRNSASALSRSYVMSTRT
SSREGRRPRTGDNGALIRSGRLSIRMSRQPSTYGELKVLVETKKLGGGVV
RGLVGLQNLGNTCFMNSALQCLMNCEALADYFLGFNWKGEINKGNFLGHG
GLMASAFGALTNEIWTSKKASLRPGDFKAQGGGGRTGFWARAARRAGVLG
VSSGRCARGPQQGPQRRAKVRGGQGGQGGGA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001394	Peptidase_C19_UCH
IPR018200	USP_CS
IPR038765	Papain-like_cys_pep_sf