prot_L-elsbetiae_contig8868.17890.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8868.17890.1
Unique Nameprot_L-elsbetiae_contig8868.17890.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length321
Homology
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BLAST of mRNA_L-elsbetiae_contig8868.17890.1 vs. uniprot
Match: A0A6H5LC44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC44_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 1.310e-46
Identity = 113/162 (69.75%), Postives = 123/162 (75.93%), Query Frame = 0 
Query:   44 GTGRRAERGRLSTLLDQLKDEIEFHANAKRDMDMELKRVRQRHRLMEDRAAEEKQKALAAEAKATKLQAKNKILNDDNTQLRQILQQIQDAGVLQQEVGNAPQSQQQXXP-----GAAGAPIPMSESSSGVQSVAPISSNSNAGGTGAQG------GIGGML 194
            G GRRAERGRLSTLLDQLKDEI+FHA AKRDMD+ELKRVRQRHRLMEDRAAEEKQK  A+EAK  KLQAKNK L+++NT+L+QILQQIQDAGVL QE G A QS Q XX         G  +P SESSSGV S  P SS+SN GG  A G      GIGGML
Sbjct:  398 GXGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAASEAKVAKLQAKNKFLSEENTKLKQILQQIQDAGVLPQEAGGASQSHQXXXXXXXXXSPTGIALPASESSSGVSSGTPASSSSNKGGIMAHGQSPGGTGIGGML 559
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BLAST of mRNA_L-elsbetiae_contig8868.17890.1 vs. uniprot
Match: D7FQ62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ62_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.210e-41
Identity = 81/95 (85.26%), Postives = 89/95 (93.68%), Query Frame = 0 
Query:   39 RVKDDGTGRRAERGRLSTLLDQLKDEIEFHANAKRDMDMELKRVRQRHRLMEDRAAEEKQKALAAEAKATKLQAKNKILNDDNTQLRQILQQIQD 133
            RVKDDGTGRRAERGRLSTLLDQLKDEI+FHA AKRDMD+ELKRVRQRHRLMEDRAAEEKQK  A+EAK  KLQAKNK L+++NT+L+QILQQIQD
Sbjct:   38 RVKDDGTGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAASEAKVAKLQAKNKFLSEENTKLKQILQQIQD 132
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8868.17890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LC44_9PHAE1.310e-4669.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ62_ECTSI1.210e-4185.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8868contigL-elsbetiae_contig8868:312..3121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8868.17890.1mRNA_L-elsbetiae_contig8868.17890.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8868 312..3121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8868.17890.1 ID=prot_L-elsbetiae_contig8868.17890.1|Name=mRNA_L-elsbetiae_contig8868.17890.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=321bp
MGIGASGGGGGLSQGGSGAGGSGTGSGAGGSAGGGGVVRVKDDGTGRRAE
RGRLSTLLDQLKDEIEFHANAKRDMDMELKRVRQRHRLMEDRAAEEKQKA
LAAEAKATKLQAKNKILNDDNTQLRQILQQIQDAGVLQQEVGNAPQSQQQ
QQPGAAGAPIPMSESSSGVQSVAPISSNSNAGGTGAQGGIGGMLAAAAAQ
QQQQQQQVQGQGMRKGSGSMQQQQHSAPLGGAGRGQQGLQHPLSLGPSSR
ISPSAPGLEDPRSPQRRRSSDPAGPESGTVPSTNHHWRNATHTGVLGVMG
MSSPLPSPANSGPWQGHGKNW
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