prot_L-elsbetiae_contig8865.17886.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8865.17886.1
Unique Nameprot_L-elsbetiae_contig8865.17886.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length425
Homology
BLAST of mRNA_L-elsbetiae_contig8865.17886.1 vs. uniprot
Match: D8LJJ2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ2_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 7.140e-113
Identity = 207/287 (72.13%), Postives = 224/287 (78.05%), Query Frame = 0
Query:    1 RFHALGRDSHAAIEAEGQARNESVRRRKQEREDALLAKLREQSKCKVNWNFSEEELERGKKMIAKAASTYDKARLGADIDRIAQMKMDPTAFRAQLLQNFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMGREERAKNLAEAERQRLRADKKELRFRRRLEDRFIEQTAAKARRRSKGSSTNVVWPSLAYDPYEDDYSMDDH----GTSSHTPGNSVGGSATAGRVGG------GDAMEKPGGAPSRRGRPKISASTAEFLAQIRKEEMAIRTMASHGRQR 277
            RFH L RDSHAA  AEGQARNE+ RRR +E+E+ALL KLREQSKCKVNW+FSE+EL+RG KMIA AASTYDKARLGADI+RIAQMKMDPTAFRAQLL NFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMGREERAKNLAEAERQR RAD KE  FR+RLEDRFIEQTAAK           VVWP L YDP++DDY+MDDH       S T   SVG + + GR         GD   +P  +  RR RPKISASTAEFLAQIRKEEM IR M   GR+R
Sbjct:  199 RFHTLARDSHAAKVAEGQARNETARRRNREQEEALLTKLREQSKCKVNWSFSEDELKRGLKMIAVAASTYDKARLGADINRIAQMKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMGREERAKNLAEAERQRHRADLKEKNFRQRLEDRFIEQTAAK-----------VVWPRLMYDPFDDDYNMDDHDPATSVGSTTLSKSVGDNKSRGRSNNDNNNEPGDVSREP--SARRRRRPKISASTAEFLAQIRKEEMTIRAMTCRGRRR 472          
BLAST of mRNA_L-elsbetiae_contig8865.17886.1 vs. uniprot
Match: A0A6H5KBB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB4_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 4.530e-62
Identity = 137/220 (62.27%), Postives = 148/220 (67.27%), Query Frame = 0
Query:   85 MKMDPTAFRAQLLQNFRVRLGPGELGAVFTAFDKDNSKLIDGTE-----------------LMHEFFRMGREERAKNLAEAERQRLRADKKELRFRRRLEDRFIEQTAAKARRRSKGSSTNVVWPSLAYDPYEDDYSMDDHGTS----SHTPGNSVGGSATAGRVGG------GDAMEKPGGAPSRRGRPKISASTAEFLAQIRKEEMAIRTMASHGRQR 277
            MKMDPTAFRAQLL NFRVRLGPGELGAVFTAFDKDNSKLIDGTE                 LMHEFFRMGREERAKNLAEAERQR RAD KE  FRRRLEDRFIEQTAAK           V WP L YDP+++DY+MDDH  +    S +   SVG + + G          GD   +P  +  RR RPKISASTAEFLAQIRKEEM IR M   GR+R
Sbjct:    1 MKMDPTAFRAQLLMNFRVRLGPGELGAVFTAFDKDNSKLIDGTETFTLAADTYTREHARTKLMHEFFRMGREERAKNLAEAERQRHRADTKEKNFRRRLEDRFIEQTAAK-----------VEWPRLMYDPFDEDYNMDDHDPATSVRSTSLSKSVGDNKSRGSSNNDNNNETGDVSREP--SARRRRRPKISASTAEFLAQIRKEEMTIRAMTCRGRRR 207          
BLAST of mRNA_L-elsbetiae_contig8865.17886.1 vs. uniprot
Match: A0A835YPN5_9STRA (EF-hand domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN5_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.050e-21
Identity = 89/279 (31.90%), Postives = 134/279 (48.03%), Query Frame = 0
Query:    2 FHALGRDSHAAIEAEGQARNESVRRRKQEREDALLAKLREQSKCKVNWNFSEEELERGKKMIAKAASTYDKARLGADIDRIAQMKMDPTAFRAQLLQNFRVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMGREERAKNLAEAERQRLRADKKELRFRRRLEDRFIEQTAAKARRRSKGSSTNVVWPSLAYDPYED--DYSMDDHGTSSHTPGNSVGGSATAGRVGGGDAMEKPGGAPSRRGR--------PKISASTAEFLAQIRKEEMAIRTM 270
            F  LGR    A     + ++E++R      +D ++++L      +VNW+ S+         +AK A+ YD+ R    +  +    MD T F  QL Q F +RL   ELGA+F  FD D    +DG E ++ FF++GREERAK LAEAER R R + K  RF   L+ R + ++ AK           V WP + +DPY    +  +D   +   +P +     A     G G+A   P  +P  R R        P ++ +TA FL Q+   E +I+ M
Sbjct:  307 FTQLGRHERYAQLQRQRRQDEALRXXXXRHQDEVVSRLGALVAARVNWSPSDAARATALNKVAKEAAHYDRDR-SIGLQNMLSGSMDVTGFNTQLRQGFGIRLSSAELGALFKVFDLDGGGTVDGAEFLNAFFKLGREERAKQLAEAERTRQRMEDKRRRFNESLQTRLVLRSTAK-----------VEWPIMEFDPYSTRAESMIDSARSEDESPLD-----AALNAAGVGNARSSP--SPDNRHRSSAVAPALPPVTEATAAFLHQLDIVERSIKKM 566          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8865.17886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJJ2_ECTSI7.140e-11372.13EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KBB4_9PHAE4.530e-6262.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPN5_9STRA3.050e-2131.90EF-hand domain-containing protein n=2 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..163
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 117..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8865contigL-elsbetiae_contig8865:2267..7912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8865.17886.1mRNA_L-elsbetiae_contig8865.17886.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8865 2267..7912 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8865.17886.1 ID=prot_L-elsbetiae_contig8865.17886.1|Name=mRNA_L-elsbetiae_contig8865.17886.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=425bp
RFHALGRDSHAAIEAEGQARNESVRRRKQEREDALLAKLREQSKCKVNWN
FSEEELERGKKMIAKAASTYDKARLGADIDRIAQMKMDPTAFRAQLLQNF
RVRLGPGELGAVFTAFDKDNSKLIDGTELMHEFFRMGREERAKNLAEAER
QRLRADKKELRFRRRLEDRFIEQTAAKARRRSKGSSTNVVWPSLAYDPYE
DDYSMDDHGTSSHTPGNSVGGSATAGRVGGGDAMEKPGGAPSRRGRPKIS
ASTAEFLAQIRKEEMAIRTMASHGRQRRRRRDNSHSGEESRACFAPHGGR
RTTAAAAGSRSPPPPRLTTKQPAPSQFTSTSQGDKENDRPSGGSGSSSSV
RRSSDSTSALAGAVADSSHIPTAAAAAAAAAPAEGVAGAAGADAMRFSAG
DGRVSTAASGHSTARGSTARSSRDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS