prot_L-elsbetiae_contig8860.17882.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8860.17882.1
Unique Nameprot_L-elsbetiae_contig8860.17882.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length142
Homology
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BLAST of mRNA_L-elsbetiae_contig8860.17882.1 vs. uniprot
Match: A0A6H5K0G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G2_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 2.020e-9
Identity = 51/89 (57.30%), Postives = 56/89 (62.92%), Query Frame = 0 
Query:    1 MAPSKKKAKTP-RAADAGTASGAGAPG---SSLGTKRGTSKPVIQQQ-NADHIKTATAPVAPAVSSRPKRNAEKKKYDDSEDERPQHLS 84
            MAPSKKK KTP +AAD+ TA          S   + R   KP  Q Q +ADH K AT      VS RPKRNAEKKKYDDSED+RPQHLS
Sbjct:    1 MAPSKKKPKTPSKAADSSTAXXXXXXXXXXSQATSSRVAPKPGQQAQLSADHAKAAT------VSLRPKRNAEKKKYDDSEDDRPQHLS 83
[Close]
BLAST of mRNA_L-elsbetiae_contig8860.17882.1 vs. uniprot
Match: D8LD54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD54_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 6.360e-8
Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:   33 RGTSKPVIQQQ-NADHIKTATAPVAPAVSSRPKRNAEKKKYDDSEDERPQHLS 84
            R   KP  Q Q +ADH K A      AVSSRPKRNAEKKKYDDSED+RPQHLS
Sbjct:   37 RAAPKPGQQAQLSADHNKAA------AVSSRPKRNAEKKKYDDSEDDRPQHLS 83
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8860.17882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0G2_9PHAE2.020e-957.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD54_ECTSI6.360e-867.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8860contigL-elsbetiae_contig8860:963..4092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8860.17882.1mRNA_L-elsbetiae_contig8860.17882.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8860 963..4475 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8860.17882.1 ID=prot_L-elsbetiae_contig8860.17882.1|Name=mRNA_L-elsbetiae_contig8860.17882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp
MAPSKKKAKTPRAADAGTASGAGAPGSSLGTKRGTSKPVIQQQNADHIKT
ATAPVAPAVSSRPKRNAEKKKYDDSEDERPQHLSTRRPKKKKDAAAAASS
SDEDEGYRSEDDGGSHRKASPTGSRKAASATGGGKQAAAAAA
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