prot_L-elsbetiae_contig8839.17865.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8839.17865.1
Unique Nameprot_L-elsbetiae_contig8839.17865.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length262
Homology
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BLAST of mRNA_L-elsbetiae_contig8839.17865.1 vs. uniprot
Match: D8LSK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK9_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 1.070e-91
Identity = 169/221 (76.47%), Postives = 178/221 (80.54%), Query Frame = 0 
Query:   16 QERVRVEASRVGTAVAGRLEERARREGDSRREESLASVEIVRLQTTLRDKEERLTTTVLSYLELRHAMLRAQRVASEAREDAATGRAVDEKEMRNCRSAVAEQTKAIREQVDRTCEDVGGELRRQIQLREDEACMLQEQRAEAEELYEARAVRLEGLLEEWKAKHAALRRRFSLETEGFRRDADNIGRRFEKIRAGPPGERPPISSRSGSSARHAVERAIY 236
            +ERVRVEASRVG AVA RLEERARR                RLQT LR KEERL  TV+SYLELRHAMLRAQRVASEAREDA  GRA DE+EMR CRS  A Q +AI E+V  TCEDV  EL RQ+QLR+DE CML+EQRAEAEELYEARAVRLE LLEEWK KHAALRRRFSLETEGFRRDADNIGRRFE+IRAGPPG RP ISSRSGSSAR AVERA Y
Sbjct:  258 EERVRVEASRVGAAVAVRLEERARRXXXXXXXXXXXXXXXXRLQTALRGKEERLANTVVSYLELRHAMLRAQRVASEAREDAKKGRAADEEEMRKCRSYTAYQVQAITERVKGTCEDVESELHRQVQLRKDEVCMLREQRAEAEELYEARAVRLESLLEEWKGKHAALRRRFSLETEGFRRDADNIGRRFERIRAGPPGGRPAISSRSGSSARLAVERAFY 478
[Close]
BLAST of mRNA_L-elsbetiae_contig8839.17865.1 vs. uniprot
Match: A0A6H5K077_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K077_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 6.740e-68
Identity = 135/197 (68.53%), Postives = 145/197 (73.60%), Query Frame = 0 
Query:   76 YLELRHAMLRAQRVASEAREDAATGRAVDEKE---------------------------MRNCRSAVAEQTKAIREQVDRTCEDVGGELRRQIQLREDEACMLQEQRAEAEELYEARAVRLEGLLEEWKAKHAALRRRFSLETEGFRRDADNIGRRFEKIRAGPPGERPPISSRSGSSARHAVERAIY---SAGGRG 242
            + ELRHAMLRAQRVASEAREDA  GRA DE+E                           MR CRS +A Q +AI E+V  TCEDV  EL RQIQLR+DE CML+EQRAEAEELYEARAVRLE LLEEWK KHAALRRRFSLETEGFRRDADNIGRRFE+IRAGPPG RP ISSRSGSSAR AVERA +   +AGG G
Sbjct:   43 FQELRHAMLRAQRVASEAREDAKKGRAADEEELKPLLSSCLRSDGALLPPFALHADTCQMRKCRSYMAYQVQAITERVKGTCEDVESELHRQIQLRKDEVCMLREQRAEAEELYEARAVRLESLLEEWKGKHAALRRRFSLETEGFRRDADNIGRRFERIRAGPPGGRPAISSRSGSSARLAVERAFHPREAAGGGG 239
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8839.17865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSK9_ECTSI1.070e-9176.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K077_9PHAE6.740e-6868.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 159..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8839contigL-elsbetiae_contig8839:2218..6744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8839.17865.1mRNA_L-elsbetiae_contig8839.17865.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8839 2195..7071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8839.17865.1 ID=prot_L-elsbetiae_contig8839.17865.1|Name=mRNA_L-elsbetiae_contig8839.17865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=262bp
MYVSGCHVLRSILVCQERVRVEASRVGTAVAGRLEERARREGDSRREESL
ASVEIVRLQTTLRDKEERLTTTVLSYLELRHAMLRAQRVASEAREDAATG
RAVDEKEMRNCRSAVAEQTKAIREQVDRTCEDVGGELRRQIQLREDEACM
LQEQRAEAEELYEARAVRLEGLLEEWKAKHAALRRRFSLETEGFRRDADN
IGRRFEKIRAGPPGERPPISSRSGSSARHAVERAIYSAGGRGAAAAAAAA
GGGGAFERAYR*
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