prot_L-elsbetiae_contig883.17860.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig883.17860.1
Unique Nameprot_L-elsbetiae_contig883.17860.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length105
Homology
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BLAST of mRNA_L-elsbetiae_contig883.17860.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 7.210e-8
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:    1 MPSVEVKKPKKSRFGGMFGGSKAKIEVPEVPEVDATLPEVS 41
            +PSVEV+KPKK  FGG+FG SKAKIEV   P+VDAT+PEVS
Sbjct: 4381 VPSVEVEKPKKGLFGGLFGSSKAKIEV---PDVDATVPEVS 4418
[Close]
BLAST of mRNA_L-elsbetiae_contig883.17860.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 5.620e-6
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:    1 MPSVEVKKPKKSRFGGMFGGSKAKIEVPEVPEVDATLPEVS 41
            +PSVEVKKPKK  FGG+FG SKAKIEV   P+ D ++P+V+
Sbjct: 2033 VPSVEVKKPKKGLFGGLFGSSKAKIEV---PDADVSVPDVA 2070
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig883.17860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB94_ECTSI7.210e-873.17Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
A0A6H5K9M1_9PHAE5.620e-663.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig883contigL-elsbetiae_contig883:18050..18591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig883.17860.1mRNA_L-elsbetiae_contig883.17860.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig883 18050..18592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig883.17860.1 ID=prot_L-elsbetiae_contig883.17860.1|Name=mRNA_L-elsbetiae_contig883.17860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp
MPSVEVKKPKKSRFGGMFGGSKAKIEVPEVPEVDATLPEVSGDASLPEVS
ADVSMPDVSAPDVSGSLPEVSGDVSVPDASGTVDVEGAVPSMDVSGKYML
PWSI*
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