prot_L-elsbetiae_contig881.17842.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig881.17842.1
Unique Nameprot_L-elsbetiae_contig881.17842.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1057
Homology
BLAST of mRNA_L-elsbetiae_contig881.17842.1 vs. uniprot
Match: A0A6H5KKF1_9PHAE (VPS13 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF1_9PHAE)

HSP 1 Score: 905 bits (2338), Expect = 5.560e-293
Identity = 596/1141 (52.23%), Postives = 699/1141 (61.26%), Query Frame = 0
Query:   87 SLPQTPRTPRKPVGARAQQQPTTHEAGAIHWGGGPGPRPCREALTIVQSLRVPLSDPHYFRIADLSMYLGVTATDAEERGEVGGEALVQRTQ-----VLGGQDNADEGWTGELLVTRCAVVGNPRQPGTRADAMLSRIRVEVSKDACAAVTHLALSLKRAVASPPSPVPRR-ARSLSW-GMKDNIAPPRILSPPWGAESKSTVDTSSRRWGADQATSPR-----STADSTTAGPGVVNNWSTAIPLPRLALLSGLTTLRLNVSLAGVQARVPSTGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSNSSARAERARRCIRRVARQLLDRIHPAATSAGYRQACRLFRDEMGALGYDRAILDGVVQAVVDSAARARGPEGLDSSGKDGQEAFQPPSEMPPSPPRGAAAGLQQETTVLP-----EERERDG----LRELVEAGMAALPALPV-SESGAACGGNAGVDQEPLLLDIVSVEASGLTLALTRLTYDTRFTTTAEAIVVRDSDGIRVLSAGRV--GGSDDDDEISAGKSNTA--GGDDA----EGAAPASKKSNVSVKMSASRLKRHQARKGQERDVASAREKIEAAAATLAAENKKETSALLISFMACDKRHIFGSGGDTPNIVAAAGRLAASASRGSAPPPEPGLVESLCRDRERRASVAIDQLSFVASPNGFLTAARAAAALEAVAADAAAALAPPNGDRDGMGVAATTEGKKSVDVDAAVLPAAPLLLRPSVSTSVHVKVGEFRSLLSLESRPLASLSVTGLAFEASRSEWWDLDEINPAIFRNLGHPHTSVN-------------VDLERKMPSVGWPGWAWTGGRHRTALGYLRVSLQGLELLDLTTD---------------------------------------------------------------------------------------------------------------------AEITKYFGPDRLGPVVAVVRSFGRRGGG------VAGSEAEDESVAVVVGEEDLAVPDEWSIASSEDGRDGDPGTARGGAGASXXXXXXXXXXXA-----------GMRVIAVLQDLTVVVPRNTHSREAAAVECKELVLEVSR 1050
            S PQTP +  +PV +  Q       A A HWGGGPGPRPC  AL IVQSLR+PLSDPHYFR+ADLS+ LGVT     E  + G EA VQR +     VLGGQ+N DEGWTGELLVTRCAVVGNPRQPGTRADAMLSRIRVEVSK+A AA+T L LSLKRAVA PP+P P   +R LS  GM+D I  P+IL PPWG  ++       RR G D+A SPR     +T+ +T  G GV NNWS A+PLPRLALLSGLTTLRL+VSLAGVQARV S GL +                                                  +  ARAERARRC+RRVARQL++R+HPAA S GYRQACRLFRDEMGALGYD+  LDGVV+A++++ AR R P    ++G +G        + P S P  +    QQ+ T +P     EE +  G    +RELVEAGMA L    V +E+G   GG+  V +EP+LLDI +VEASGLTLALTRLTYDTR T TAEAI+VRDSDGIRVLSAGR+  G   +D + SAG  NT+   GDDA    EGAA ++KKS+V  ++S SRLKRHQAR+  ERD  SARE+IEAAAATLA   K+ETSALLISF+ACDKRHIFGSGGD+PN+VAA GRLAASASRGSAPPPEPGL+E L RDRERRASV+IDQ+SFVA+PNGFLTAARAA +LEA AA+   ALA P  D DG G   +   +K V   ++  P+AP++LRPSVSTSVH++V EFR LLSLESRPLASLS+TGL FEASRSEWWDLD+I   IFR+LG  + +                + +  MP+ GWPGW   GGRHRTALGYLR SLQGLELLDLT D                                                                                                                     AE+TKYFGPDRLGPV A  R FG            AGSEAE+ESVAVV+GE+D AVPD+WS+  SEDG DG+    RGG GA+                       G+RV AVLQ LTVV+PR+THSREAAAV+C+ELVLEV +
Sbjct: 1180 SPPQTPTSATEPVDSAGQPAAPHEGARATHWGGGPGPRPCGGALAIVQSLRLPLSDPHYFRVADLSLSLGVTEEGPGE--DAGEEAPVQRRRRRTPVVLGGQENTDEGWTGELLVTRCAVVGNPRQPGTRADAMLSRIRVEVSKEAVAAITLLTLSLKRAVAVPPAPSPPAFSRGLSTEGMEDCIPAPQILPPPWGVGAQHNATRRGRRRG-DRAASPRIVASCATSATTRVGTGVANNWSGAVPLPRLALLSGLTTLRLDVSLAGVQARVLSRGLRNDDDVGPSSNSSSDHGQRNNDSEGAHPQGVGVTAPSSAKDSRR--------HGGARAERARRCVRRVARQLVERVHPAAASTGYRQACRLFRDEMGALGYDQGSLDGVVEALLETTARIRDPAATAAAGHEGSGKESAFLQYPASMPGRSGQAQQQQETTMPGRDTVEEADAPGEPADVRELVEAGMAVLSDASVPAEAGRGSGGDGAVGEEPVLLDIAAVEASGLTLALTRLTYDTRLTATAEAIIVRDSDGIRVLSAGRIDLGDGGEDGKRSAGNGNTSKGSGDDASTAAEGAA-SNKKSSVPARVSVSRLKRHQARRDHERDAMSARERIEAAAATLAENQKRETSALLISFVACDKRHIFGSGGDSPNVVAAVGRLAASASRGSAPPPEPGLLECLSRDRERRASVSIDQISFVAAPNGFLTAARAATSLEAAAAEXXXALARPAQD-DGFGPPGS---EKRVAAASSRRPSAPVVLRPSVSTSVHLQVREFRCLLSLESRPLASLSMTGLVFEASRSEWWDLDDIKACIFRDLGETNAAATSPRPGEESTGAAAAESKSMMPTAGWPGWTRDGGRHRTALGYLRASLQGLELLDLTADGQLHNQVISHEGAAPGATAASHATANAXXXXXXXXXXXXHRASSSASRGVRAHETAXXXXXXXXXXXXXXXXXXERLPVIVVELTPDTSRGRGSGGGGREIIASVRGLRVCFLHRFVAEVTKYFGPDRLGPVFAEARRFGGXXXXXXXAVDTAGSEAENESVAVVMGEDDQAVPDKWSVVGSEDGGDGNSRADRGGGGAARVGTPVSDGADGSGGGGKAEAETGVRVTAVLQTLTVVIPRSTHSREAAAVKCEELVLEVRK 2304          
BLAST of mRNA_L-elsbetiae_contig881.17842.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 914 bits (2362), Expect = 1.500e-290
Identity = 601/1037 (57.96%), Postives = 695/1037 (67.02%), Query Frame = 0
Query:   87 SLPQTPRTPRKPVGARAQQQPTTHEAGAIHWGGGPGPRPCREALTIVQSLRVPLSDPHYFRIADLSMYLGVTATDAEERGEVGGEALVQRTQ-------VLGGQDNADEGWTGELLVTRCAVVGNPRQPGTRADAMLSRIRVEVSKDACAAVTHLALSLKRAVASPPSPVPRR-ARSLSW-GMKDNIAPPRILSPPWGAESKSTVDTSSRRWGADQATSPRSTADSTTA-----GPGVVNNWSTAIPLPRLALLSGLTTLRLNVSLAGVQARVPSTGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSNSSARAERARRCIRRVARQLLDRIHPAATSAGYRQACRLFRDEMGALGYDRAILDGVVQAVVDSAARARGPE---GLDSSGKDGQEAFQPPSEMPPSPPRGAAAGLQQETTV----LPEERERDG----LRELVEAGMAALPALPV-SESGAACGGNAGVDQEPLLLDIVSVEASGLTLALTRLTYDTRFTTTAEAIVVRDSDGIRVLSAGRVGGSD--DDDEISAGKSNT--AGGDDA----EGAAPASKKSNVSVKMSASRLKRHQARKGQERDVASAREKIEAAAATLAAENKKETSALLISFMACDKRHIFGSGGDTPNIVAAAGRLAASASRGSAPPPEPGLVESLCRDRERRASVAIDQLSFVASPNGFLTAARAAAALEAVAADAAAA-LAPPNGDRDGMGVAATTEGKKSVDVDAAVLPAAPLLLRPSVSTSVHVKVGEFRSLLSLESRPLASLSVTGLAFEASRSEWWDLDEINPAIFRNLGH-------------PHTSVNVDLERKMPSVGWPGWAWTGGRHRTALGYLRVSLQGLELLDLTTDAEITKYFGPDRLGPVVAVVRSFGRRGGG------------VAGSEAEDESVAVVVGEEDLAVPDEWSIASSEDGRDGDPGTARGGA-------------GASXXXXXXXXXXXAGMRVIAVLQDLTVVVPRNTHSREAAAVECKELVLEVSR 1050
            S PQTP +  +PV    Q       A   HWGGGPGPRPC  AL IVQSLRVPLSDPHYFR+ADLS+ LGVT     +  + G E  VQR         VLGGQ+N DEGWTGELLVTRCAVVGNPRQPGTRADAMLSRIRVEVSK+  AA+T L LSLKRAV+ PP+P P   +R LS  GM+D I  P+I  PPWG  ++       RR G D A SPRS A   T+     G GV NNWS A+PLPRLALLSGLTTLRLNVSLAGVQARV S GL +                                                  +  AR ERARRC+RRVARQL++R+HPAA S GYRQACRLFRDEMGALGYD+  LDGVV+A++++ AR R P    G + SGK+    FQ P+ MP    R   A  QQE T+      EE +  G    +RELVEAGMA L    V ++ G+  GG+  V +EP+LLDI +VEASGLTLALTRLTYDTRFT TAEAIVVRDSDG+R+LSAGR+G  D  DD + SAG   T    GDDA    EGAA ++K+S+V  ++SASRLKRHQAR+GQERD  SARE+IEAAAATLA   K+ETSALLISF+ACDKRHIFGSGGD+PN+VAA GRLAASASRGSAPPPEPGL+E L RDRERRASV+IDQ+SFVA+P+GFLTAARAA +LEA         LA P  D DG    A    +K     ++  P+AP++LRPSVSTSVH++V EFRSLLSLESRPLASLS+TGL FEASRSEWWDLD+I+P IFR+LG              P  +   + +  MP+VGWPGW   GGRHRTALGYL V             AEITKYFGPDRLGPV A VR FG  GGG             AGSEAE+ESVAVV+GE+D AVPD+WS+  SEDG DG+  T +GG              GA XXXXXXX    AGMRV AVLQ+LTVV+PR+THSREAAAV+C+ELVLEV +
Sbjct: 1277 SPPQTPTSATEPVDGAGQAAAPHEGARETHWGGGPGPRPCEGALAIVQSLRVPLSDPHYFRVADLSLSLGVTEEGPGK--DAGEEEFVQRXXXXXRIPLVLGGQENTDEGWTGELLVTRCAVVGNPRQPGTRADAMLSRIRVEVSKETVAAITLLTLSLKRAVSVPPAPSPPAFSRGLSREGMEDCIPAPQIFPPPWGVGAEGNATRRGRRRG-DPAASPRSVASCATSSTAGVGTGVANNWSGAVPLPRLALLSGLTTLRLNVSLAGVQARVLSRGLRNDDDVGPSSSDYGQRNNNTEGGHPQGVGVTTPSSAKDSRR-----------HGGAREERARRCVRRVARQLVERVHPAAASTGYRQACRLFRDEMGALGYDQGSLDGVVEALLETTARIRNPATAAGHEGSGKEAAF-FQYPASMPG---RSGQAQQQQEATMPGRATVEEADAPGEQADVRELVEAGMAVLSDASVPAKGGSGSGGDGAVGEEPVLLDIAAVEASGLTLALTRLTYDTRFTATAEAIVVRDSDGVRILSAGRIGLGDGGDDGKRSAGNGITPKGSGDDASTTAEGAA-SNKRSSVPARVSASRLKRHQARRGQERDATSARERIEAAAATLAENQKRETSALLISFVACDKRHIFGSGGDSPNVVAAVGRLAASASRGSAPPPEPGLLECLSRDRERRASVSIDQISFVAAPSGFLTAARAATSLEAAXXXXXXXXLARPAQD-DGF---APPGSEKRAVAASSRHPSAPVVLRPSVSTSVHLQVREFRSLLSLESRPLASLSMTGLVFEASRSEWWDLDDIDPCIFRDLGETNAAATSPRPGEEPAGAAAAESKPMMPTVGWPGWTRDGGRHRTALGYLFV-------------AEITKYFGPDRLGPVFAEVRRFG--GGGXXXXXXXEGAVDTAGSEAENESVAVVMGEQDQAVPDKWSVVGSEDGGDGNSRTDQGGXXXXXXRVGTPVSDGAXXXXXXXXAEAEAGMRVTAVLQNLTVVIPRSTHSREAAAVKCEELVLEVRK 2275          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig881.17842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKF1_9PHAE5.560e-29352.23VPS13 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G8Y9_ECTSI1.500e-29057.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 652..679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig881contigL-elsbetiae_contig881:26482..30805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig881.17842.1mRNA_L-elsbetiae_contig881.17842.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig881 26482..30805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig881.17842.1 ID=prot_L-elsbetiae_contig881.17842.1|Name=mRNA_L-elsbetiae_contig881.17842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1057bp
EGVRPTTASPRNPAGSSSRALPPSSPPPSLPLSPAPLPPVREEDHGKETE
GGIDGEGRGGLVSSPEERTRRDVSPGMQPTTTSPARSLPQTPRTPRKPVG
ARAQQQPTTHEAGAIHWGGGPGPRPCREALTIVQSLRVPLSDPHYFRIAD
LSMYLGVTATDAEERGEVGGEALVQRTQVLGGQDNADEGWTGELLVTRCA
VVGNPRQPGTRADAMLSRIRVEVSKDACAAVTHLALSLKRAVASPPSPVP
RRARSLSWGMKDNIAPPRILSPPWGAESKSTVDTSSRRWGADQATSPRST
ADSTTAGPGVVNNWSTAIPLPRLALLSGLTTLRLNVSLAGVQARVPSTGL
LHHDDAAVCNDDDNKNGGVDDAASQGNTARNGPSSQEASPPASPRKAGGH
SSNSSARAERARRCIRRVARQLLDRIHPAATSAGYRQACRLFRDEMGALG
YDRAILDGVVQAVVDSAARARGPEGLDSSGKDGQEAFQPPSEMPPSPPRG
AAAGLQQETTVLPEERERDGLRELVEAGMAALPALPVSESGAACGGNAGV
DQEPLLLDIVSVEASGLTLALTRLTYDTRFTTTAEAIVVRDSDGIRVLSA
GRVGGSDDDDEISAGKSNTAGGDDAEGAAPASKKSNVSVKMSASRLKRHQ
ARKGQERDVASAREKIEAAAATLAAENKKETSALLISFMACDKRHIFGSG
GDTPNIVAAAGRLAASASRGSAPPPEPGLVESLCRDRERRASVAIDQLSF
VASPNGFLTAARAAAALEAVAADAAAALAPPNGDRDGMGVAATTEGKKSV
DVDAAVLPAAPLLLRPSVSTSVHVKVGEFRSLLSLESRPLASLSVTGLAF
EASRSEWWDLDEINPAIFRNLGHPHTSVNVDLERKMPSVGWPGWAWTGGR
HRTALGYLRVSLQGLELLDLTTDAEITKYFGPDRLGPVVAVVRSFGRRGG
GVAGSEAEDESVAVVVGEEDLAVPDEWSIASSEDGRDGDPGTARGGAGAS
SAGASGSGEAGAGMRVIAVLQDLTVVVPRNTHSREAAAVECKELVLEVSR
EESAQS*
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