prot_L-elsbetiae_contig8803.17836.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8803.17836.1
Unique Nameprot_L-elsbetiae_contig8803.17836.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length183
Homology
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BLAST of mRNA_L-elsbetiae_contig8803.17836.1 vs. uniprot
Match: D7FJA4_ECTSI (Thioredoxin/AMP-activated kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA4_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 3.430e-41
Identity = 97/184 (52.72%), Postives = 122/184 (66.30%), Query Frame = 0 
Query:    1 MQRASSIAT--VRLAPRAGSVVSTPPTGGSRSSPVPLLAPGVYKLPPPTALWCSREITGGASAVQTVASEAELAQLLTSTKPNSLVVLNFCTALSKASNAAEAKFEKTASKFGECGGGMGVHFAKVNFESNHQLFEKMGIRSVPHVQIFSGDSGKVADFSLTNLRNNTLDYLLSDRRESMLAWQ 182
            MQ ASS+AT   RLAPR  SV+ + P    +   +P   PG Y   P TALW     +G  S++QTV  E ELAQLL +T+P+SLVV+ F  AL KAS A E KF++TA++F EC     V FA V+  SN  L +KMG+RSVPHVQIFSG +GK+ADFSL     +TLD LL +RR+SMLAW+
Sbjct:    1 MQLASSVATRAARLAPR--SVIPSTPKPAPK---IPGHLPGAYN--PSTALW--HHDSGETSSIQTVRDETELAQLLDATRPSSLVVVKFGKALCKASKAVEEKFKQTAAEFSECDK-TDVQFASVDSGSNWLLCKKMGVRSVPHVQIFSGYNGKIADFSLAPPEYDTLDALLGERRDSMLAWK 174
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BLAST of mRNA_L-elsbetiae_contig8803.17836.1 vs. uniprot
Match: D7G5S5_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S5_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 4.540e-25
Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 0 
Query:   61 AVQTVASEAELAQLLTSTKPNSLVVLNFCTALSKASNAAEAKFEKTASKFGECGGGMGVHFAKVNFESNHQLFEKMGIRSVPHVQIFSGDSGKVADFSLTNLRNNTLDYLLSDRRESMLA 180
            A +TV +EAEL +LL S   + LVV+ F   L  AS A E +F +TA++FG+      V FA V F+SN QL ++MGI+SVPHVQIFSG  GK+ADFS+  L+ NTL  LLS+RR+S+ A
Sbjct:   85 APKTVKNEAELTKLLAS---DGLVVVKFHAILCDASRAVEGRFRQTAAEFGDMDNKQ-VTFADVCFDSNRQLCKRMGIKSVPHVQIFSGSKGKIADFSIAPLQYNTLTSLLSERRDSVAA 200
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8803.17836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJA4_ECTSI3.430e-4152.72Thioredoxin/AMP-activated kinase n=1 Tax=Ectocarpu... [more]
D7G5S5_ECTSI4.540e-2552.50Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 54..175
e-value: 3.4E-11
score: 44.9
IPR021149Oligosaccharyl transferase complex, subunit OST3/OST6PFAMPF04756OST3_OST6coord: 74..154
e-value: 1.2E-6
score: 28.1
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 59..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8803contigL-elsbetiae_contig8803:1858..4034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8803.17836.1mRNA_L-elsbetiae_contig8803.17836.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8803 1510..4792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8803.17836.1 ID=prot_L-elsbetiae_contig8803.17836.1|Name=mRNA_L-elsbetiae_contig8803.17836.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp
MQRASSIATVRLAPRAGSVVSTPPTGGSRSSPVPLLAPGVYKLPPPTALW
CSREITGGASAVQTVASEAELAQLLTSTKPNSLVVLNFCTALSKASNAAE
AKFEKTASKFGECGGGMGVHFAKVNFESNHQLFEKMGIRSVPHVQIFSGD
SGKVADFSLTNLRNNTLDYLLSDRRESMLAWQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021149OligosaccharylTrfase_OST3/OST6
IPR036249Thioredoxin-like_sf