prot_L-elsbetiae_contig8802.17835.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8802.17835.1
Unique Nameprot_L-elsbetiae_contig8802.17835.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length448
Homology
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BLAST of mRNA_L-elsbetiae_contig8802.17835.1 vs. uniprot
Match: D7FM79_ECTSI (EsV-1-209 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM79_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 7.140e-18
Identity = 111/403 (27.54%), Postives = 161/403 (39.95%), Query Frame = 0 
Query:   88 DLVVLKFTTKT--NP-FSWKNPLKLFVRAECEVLRRRKMEVAADKLQEKRKKEKRDMDDRLDR------------------LVKKHKMDPEVVADAALKTAIFGDYVDSPKPTTKLKAIRASFKLRDQAVRTLSADPARALNFF----------------------------VLSKMAAPADDD---EEEQADMTTKFLENARLLEDVLNNQPASKLILQFLTPAEGRLVENETNLRRLVETANLRDGK--------------------------------------------------------ARTRLKERLERLGGIPDIDAFLAEDAVSDRLGRFDDFPSDEVAVARKLHEFHQTRGDSAARKAALKKALAAEDASTSGHHGTAAVARSFAKGSTDLDL 382
            DL  L  TT T  NP +    P  L+VRAE E LR R+  ++A+K+                                   L   H +DPE+V +  LK AIFGDY+DS  P T L+  R +++ +DQA +T+ ADP RALNF                             V+  +++P +++    ++QA M   F     +++ V+  +  S  I+ FL P + + +E ++N++RLV  A     K                                                        AR RL   +E+LGGIPD+ AFL + AV +R+ R                     RGD AAR+  L KA+ AE  S     G +A  R F  GSTD+DL
Sbjct:   11 DLTELDNTTSTTTNPHYKGSRPTVLYVRAEIEALRVRERRISAEKIARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLKADHDIDPEMVTNEDLKNAIFGDYLDSDTPFTSLQDARQAYRFKDQAAKTVPADPVRALNFLQNVEFLTSQTTRAVPGDSVSVIQRALQSVVDALSSPGNNEVLGNDDQA-MFDTFWRTNDIIQGVIGREGLSVAIVSFLNPEDVKRLE-QSNMKRLVYNARFISEKCQARRRIGRVIQRVVGQEGLSAAIVSFLCPADVRRLQKSSMRQLASNAKFVSKRSDARRRLCCEIEQLGGIPDVGAFLEDPAVLERVTRL--------------------RGDPAARREMLSKAMEAEGMSI---RGDSAFCREFINGSTDVDL 388
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8802.17835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM79_ECTSI7.140e-1827.54EsV-1-209 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..147
IPR037129XPA domain superfamilyGENE3D3.90.530.10coord: 72..154
e-value: 1.1E-5
score: 27.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8802contigL-elsbetiae_contig8802:902..5422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8802.17835.1mRNA_L-elsbetiae_contig8802.17835.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8802 799..5429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8802.17835.1 ID=prot_L-elsbetiae_contig8802.17835.1|Name=mRNA_L-elsbetiae_contig8802.17835.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=448bp
MASSSTAAATIGKGKGKGKARAKAKAKPEAPCELCHGSLSAGGEADAFMD
VPLTVSCALCAEGFRSHEGMLLACQTRAMKDFKLSHDDLVVLKFTTKTNP
FSWKNPLKLFVRAECEVLRRRKMEVAADKLQEKRKKEKRDMDDRLDRLVK
KHKMDPEVVADAALKTAIFGDYVDSPKPTTKLKAIRASFKLRDQAVRTLS
ADPARALNFFVLSKMAAPADDDEEEQADMTTKFLENARLLEDVLNNQPAS
KLILQFLTPAEGRLVENETNLRRLVETANLRDGKARTRLKERLERLGGIP
DIDAFLAEDAVSDRLGRFDDFPSDEVAVARKLHEFHQTRGDSAARKAALK
KALAAEDASTSGHHGTAAVARSFAKGSTDLDLDEVVGIVKISEHLTKLGG
YHTWVTKHEAVEEKFKTLLHFECLGLEDSYKKSIKGCRAAPGNTLYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037129XPA_sf