prot_L-elsbetiae_contig8796.17825.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8796.17825.1
Unique Nameprot_L-elsbetiae_contig8796.17825.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length498
Homology
BLAST of mRNA_L-elsbetiae_contig8796.17825.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 5.920e-75
Identity = 213/392 (54.34%), Postives = 235/392 (59.95%), Query Frame = 0
Query:  132 IEDGGSRKMGGHRSTNSLGRMSEEDKEESPGGGDGRCIAAKAAYGNSGQGGSSQMFGAKPPQDP-VEFRRTSTSSRHSGGTVATPSSGLGPLSSAGIFKSPPSPECVART---REVVPADDGSGR------TAVFPPTQQHRTVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQWDDVVGRMTTPQGSGHSLEMNSVDLNSNGS--QPPVKAELDALLRTSNNSVGTWNSNDSQAALLGPMPPPQAVQPPLRGWSFDSAQQGADNNSGNMVVDLSDVNALFQEGGGNXXXXXXXXXXXAGSRGSNXXXXXXXXXXXXXXXXXXXXXX-------------EAMSNAKWADESPLPMEKVIIEPSRN 498
            IEDGGSRKMGGHRSTNSLGRM +ED+E+S GGG  R ++ K     S QG S  + G+   Q+P   FRRTS  SR S G V  PSSGLGPLS+ GIFK+P S      T   R VVPADDGSGR       AV P  QQHR VS                                                     TQWDDVV RMTTPQGSGHSLEM S + +SNGS  QPPVKAE D L+ TSNNSVGTWNSNDSQ ALLGPMPPPQ+VQPPLRGWSFDSAQ       G+ VVDLSDV+ LF+    +       XXXX       XXXXXXXXXXXXXXXXXXXXXX             EAMS+AKWA++  LPMEKV+IEPSRN
Sbjct:    6 IEDGGSRKMGGHRSTNSLGRMDDEDEEDSAGGG--RFVSNKP----SSQGDSLMVRGSSKHQEPPATFRRTS--SRDSDGQVV-PSSGLGPLSAVGIFKNPSSSSDGPSTVPPRAVVPADDGSGRGTPGALPAVNP--QQHRVVSNDAMQPPSSQKQHSPQPLPQPFQQALQHQQHHFGRPAIAVGVAGGAVTGG---TQWDDVVRRMTTPQGSGHSLEMGS-EHSSNGSNGQPPVKAEYDPLVITSNNSVGTWNSNDSQVALLGPMPPPQSVQPPLRGWSFDSAQVADSGAGGSAVVDLSDVDGLFRGSAADGEAVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQHEAMSDAKWANDGHLPMEKVVIEPSRN 382          
BLAST of mRNA_L-elsbetiae_contig8796.17825.1 vs. uniprot
Match: D7FZ47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ47_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 2.070e-53
Identity = 106/143 (74.13%), Postives = 113/143 (79.02%), Query Frame = 0
Query:    6 SAIIPTG-AGA-----------GPRTARRKQRCWLFQVDGVKSNATEVELLASVRERYTTVKRLVVRPG---KAPGSPADGGGRNLVVEVQFTGPQPSEGPGALLCDLLCGTSVQAKPVELPRGRKKRARTDA--SSEASDSD 131
            ++I+PTG AGA           G RTARRKQRCWLFQVDGV SNA+EVELLAS+RERYTTVKRLVVRP    K   + ADG  RN+VVEVQFTGPQPSEGPGALLCDLLCG SV AKPVELPRGRKKRARTDA  S E SDSD
Sbjct:   12 ASIVPTGGAGAVXXXXXXXXXXGARTARRKQRCWLFQVDGVTSNASEVELLASIRERYTTVKRLVVRPAATSKDAVAAADGSPRNVVVEVQFTGPQPSEGPGALLCDLLCGVSVDAKPVELPRGRKKRARTDATASMEGSDSD 154          
BLAST of mRNA_L-elsbetiae_contig8796.17825.1 vs. uniprot
Match: A0A6H5JDQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ6_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.550e-25
Identity = 69/143 (48.25%), Postives = 91/143 (63.64%), Query Frame = 0
Query:   10 PTGAGAGPRTARRKQRCWLFQVDGVKSNA-TEVELLASVRERYTTVKRLVVRPGKAPGSPADGG-----------------GRNLVVEVQFTGPQPSEGPGALLCDLLCGTSVQAKPVELPRGRKKR--ARTDASSEASDSDI 132
            PTG     R  RRKQR W+F++DG+ ++  TE +L  +VRERYTTVKRL ++   +PG  ++G                     ++VE+QF GPQPSEG GALLC LL GTSV+A+PVELPRGRKK   AR+DA + A+D  +
Sbjct:   13 PTGGAGSMRPVRRKQRGWVFKIDGIANHEMTEEDLFFAVRERYTTVKRLALK-NASPGPASEGAEPASKSTHDRVGFQAAVAGGVLVEIQFAGPQPSEGCGALLCHLLRGTSVEARPVELPRGRKKNTDARSDAGAAAADGHV 154          
BLAST of mRNA_L-elsbetiae_contig8796.17825.1 vs. uniprot
Match: D8LCK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK7_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 3.510e-14
Identity = 56/147 (38.10%), Postives = 75/147 (51.02%), Query Frame = 0
Query:    4 AASAIIPTGAGAGPRTARRKQRCWLFQVDGVKSNATEVELLASVRERYTTVKRLVVRP--GKAPGSPADG----------------------------GGRNLVVEVQFTGPQPSEGPGALLCDLLCGTSVQAKPVELPRGRKKRAR 120
            A +AI+P      P     K+RCW   V  V++NA E E+L+S R+RYT+ ++L  RP    A GS +                              GGR   +E+QFTGPQP EGP  L+C+LL  T V A PV+L RGRK++ R
Sbjct:    2 AVAAIMP------PSMPSSKKRCWNLLVKDVRNNAQEAEVLSSFRKRYTSTRKLAFRPVADYAGGSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXITQGGR-ACIEIQFTGPQPIEGPAGLMCNLLQATFVSAHPVQLDRGRKRKTR 141          
BLAST of mRNA_L-elsbetiae_contig8796.17825.1 vs. uniprot
Match: A0A6H5JYP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYP1_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 5.380e-14
Identity = 52/122 (42.62%), Postives = 67/122 (54.92%), Query Frame = 0
Query:   17 PRTARRKQRCWLFQVDGVKSNATEVELLASVRERYTTVKRLVVRP--GKAPGSPADG----------------GGRNLVVEVQFTGPQPSEGPGALLCDLLCGTSVQAKPVELPRGRKKRAR 120
            P     K+RCW   V  V+++A E E+L+S R+RYT+ ++L  RP    A GS                    GGR   +E+QFTGPQP EGP  LLC LL  T V A PV+L RGRK++ R
Sbjct:    9 PSMPSSKKRCWNLLVKDVRNHAQEDEVLSSFRKRYTSTRKLAFRPVADYAGGSTXXXXXXXXXXXXXXXXITHGGR-ACIEIQFTGPQPIEGPAGLLCSLLEATFVSAHPVQLDRGRKRKTR 129          
BLAST of mRNA_L-elsbetiae_contig8796.17825.1 vs. uniprot
Match: A0A6H5JSU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSU0_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 3.880e-13
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 0
Query:   76 LVVEVQFTGPQPSEGPGALLCDLLCGTSVQAKPVELPRGRKKRARTDASSEASDSDIEDGG 136
            ++VE+QF GPQPSEG GALLC+LL G+SV+A+ VELPRGRKK+  T  + E  ++DI +GG
Sbjct:   48 MLVEIQFAGPQPSEGCGALLCNLLRGSSVEARAVELPRGRKKKIATSVTPENGNNDIFEGG 108          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8796.17825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FZ48_ECTSI5.920e-7554.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FZ47_ECTSI2.070e-5374.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDQ6_9PHAE1.550e-2548.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCK7_ECTSI3.510e-1438.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYP1_9PHAE5.380e-1442.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSU0_9PHAE3.880e-1360.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 457..477
NoneNo IPR availablePANTHERPTHR31804FAMILY NOT NAMEDcoord: 262..472
NoneNo IPR availablePANTHERPTHR31804:SF3coord: 262..472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8796contigL-elsbetiae_contig8796:3650..8043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8796.17825.1mRNA_L-elsbetiae_contig8796.17825.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8796 3333..8043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8796.17825.1 ID=prot_L-elsbetiae_contig8796.17825.1|Name=mRNA_L-elsbetiae_contig8796.17825.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=498bp
MTTAASAIIPTGAGAGPRTARRKQRCWLFQVDGVKSNATEVELLASVRER
YTTVKRLVVRPGKAPGSPADGGGRNLVVEVQFTGPQPSEGPGALLCDLLC
GTSVQAKPVELPRGRKKRARTDASSEASDSDIEDGGSRKMGGHRSTNSLG
RMSEEDKEESPGGGDGRCIAAKAAYGNSGQGGSSQMFGAKPPQDPVEFRR
TSTSSRHSGGTVATPSSGLGPLSSAGIFKSPPSPECVARTREVVPADDGS
GRTAVFPPTQQHRTVSDDSMQPPAQKQQQQQPVRQQLLLPSMQQQQLQAM
QQQHQQQQFGRPVGGGGGGTQWDDVVGRMTTPQGSGHSLEMNSVDLNSNG
SQPPVKAELDALLRTSNNSVGTWNSNDSQAALLGPMPPPQAVQPPLRGWS
FDSAQQGADNNSGNMVVDLSDVNALFQEGGGNSAAAAAAAASIAGSRGSN
ADAGAGRQQQQQQQQQQQQQQEEAMSNAKWADESPLPMEKVIIEPSRN
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