prot_L-elsbetiae_contig8787.17818.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8787.17818.1
Unique Nameprot_L-elsbetiae_contig8787.17818.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length344
Homology
BLAST of mRNA_L-elsbetiae_contig8787.17818.1 vs. uniprot
Match: D8LNF0_ECTSI (LRAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF0_ECTSI)

HSP 1 Score: 396 bits (1017), Expect = 1.090e-134
Identity = 237/355 (66.76%), Postives = 252/355 (70.99%), Query Frame = 0
Query:    1 MNEMEETVTNEGSGN---------AVELTRWQQWRD-----TAEPATGLNTTTGIGGTGSAARPIEIEDAAGTT---ATVAPGGARAEGGGGP-------LEETETLWGHAVHEHELSPGDQIYVYRGAIQHHGIVTHVPGALPAGGVPAAAGMLPHSRAAGVQVVHFDSACDGVESTSLESFLKGSTLRRATYAASAWSTGLDYGASYGCTSDDPALIVTRATEAAKFGEGASGWSGYSLLTNNCETFAYWCSTGRRVMALRQTLSRQATRGLVGAGIVAAGASAVVSAGGLASAGVAATAFVPRGVRGVQRGVQALEWATGVAVVAVAAADVVSTLVTRAPVARNINLPGGHT 331
            M EMEE  T+    N          +EL RWQQWR+     T  P TG +T           +PIEI D AGT      +A GG      GGP         E ETLWGHAVHEHELS GDQ+YVYRG IQHHGIVTHVP       VP         RA GV+VVHFDS CDGVESTSLE+FL G TLRRATY ASAWSTGLDYGASYGC +DDPALIVTRATEAAKFGEGASGWSGY+L TNNCETFAYWCSTGRR     Q LSRQA RGLVGAG+VAAGASAVVSAGG ASAG AAT  VPRGVRGVQRGV+A+EWATGVAVVAVAAADVVSTLVTRAPV RN+NL  G T
Sbjct:    1 MAEMEEMFTDSTKDNDSTLGANDPELELQRWQQWRNVDLARTVAPPTGSST-----------QPIEI-DCAGTADNNTALAGGGEEERTAGGPEGDAPVAATEGETLWGHAVHEHELSAGDQVYVYRGVIQHHGIVTHVP-------VP--------GRAGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCATDDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRR-----QVLSRQAARGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRGVRGVQRGVKAIEWATGVAVVAVAAADVVSTLVTRAPVERNLNLRSGST 323          
BLAST of mRNA_L-elsbetiae_contig8787.17818.1 vs. uniprot
Match: A0A6H5JNU1_9PHAE (LRAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU1_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 4.020e-133
Identity = 235/354 (66.38%), Postives = 251/354 (70.90%), Query Frame = 0
Query:    1 MNEMEETVTNEGSGN---------AVELTRWQQWRDT-----AEPATGLNTTTGIGGTGSAARPIEIEDAAGTTA--TVAPGGARAEGGGGPL-------EETETLWGHAVHEHELSPGDQIYVYRGAIQHHGIVTHVPGALPAGGVPAAAGMLPHSRAAGVQVVHFDSACDGVESTSLESFLKGSTLRRATYAASAWSTGLDYGASYGCTSDDPALIVTRATEAAKFGEGASGWSGYSLLTNNCETFAYWCSTGRRVMALRQTLSRQATRGLVGAGIVAAGASAVVSAGGLASAGVAATAFVPRGVRGVQRGVQALEWATGVAVVAVAAADVVSTLVTRAPVARNINLPGGHT 331
            M EMEE  T+    N          +EL RWQQWR+      A P TG           S+A+PIEI D +GT    T   GG      GGP         E ETLWGHAVHEHEL  GDQIYVYRG IQHHGIVTHVP       VP         R  GV+VVHFDS CDGVESTSLE+FL G TLRRATY ASAWSTGLDYGASYGC +DDPALIVTRATEAAKFGEGASGWSGY+L TNNCETFAYWCSTGRR     Q LSRQATRGLVGAG+VAAGASAVVSAGG ASAG AAT  VPRG+RGVQRGV+A+EWATG+AVVAVAAADVVSTLVTRAPV RN+NL  G T
Sbjct:   18 MVEMEEMFTDSTKDNDSTLGANAPELELQRWQQWRNVDLARIAAPPTG-----------SSAQPIEI-DCSGTADNNTALAGGKEERAAGGPAGDAPVAAAEGETLWGHAVHEHELCAGDQIYVYRGVIQHHGIVTHVP-------VP--------GRVGGVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRR-----QVLSRQATRGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRGLRGVQRGVKAIEWATGLAVVAVAAADVVSTLVTRAPVERNLNLRSGST 339          
BLAST of mRNA_L-elsbetiae_contig8787.17818.1 vs. uniprot
Match: A0A6P5TMJ6_PRUAV (HRAS-like suppressor 2 n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5TMJ6_PRUAV)

HSP 1 Score: 60.8 bits (146), Expect = 2.330e-7
Identity = 59/196 (30.10%), Postives = 78/196 (39.80%), Query Frame = 0
Query:   82 TLWGHAVHEHELSPGDQIYVYRGAIQHHGIVTHVPGALPAGGVPAAAGMLPHSRAAGVQVVHFDSACD-----------------GVESTSLESFLKGSTLRRATYAASAWSTGLDYGASYGCTSDDPALIVTR-ATEAAKFGE-GASGWSGYSLLTNNCETFAYWCSTGRRVMALRQTLSRQATRGLVGAGIVAA 258
            +L  + +   EL PGD IY YR    HHGI                 G + H       V+ F +  +                 GV  T ++ FLKG  L R  Y  S     L    +    S  P+    R ATE  K  E   +G+  Y LL+NNCETFA +C TG+R       LSRQ  + +   G  +A
Sbjct:    2 SLLSNRIPREELQPGDHIYSYRIGFSHHGIYV-------------GEGWVIHFTPTCKSVIRFSATYEPVTTSCRRCGHDPNKKGGVLKTCIDCFLKGDGLHRFEYNVSLSYVILKQDGTCSTWSCYPSDETVRLATEIFKKDEVDGTGFGEYDLLSNNCETFASYCKTGKR-------LSRQVIQAIASVGFPSA 177          
BLAST of mRNA_L-elsbetiae_contig8787.17818.1 vs. uniprot
Match: UPI000CED2AF9 (lecithin retinol acyltransferase n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED2AF9)

HSP 1 Score: 56.2 bits (134), Expect = 1.460e-5
Identity = 52/165 (31.52%), Postives = 70/165 (42.42%), Query Frame = 0
Query:   83 LWGHAVHEHELSPGDQIYVYRG--AIQHHGI------VTHVPGALPAGGVPAAAGMLPHSRAAGVQVVHFDSACDGVESTSLESFLKGSTLRRATYAASAWSTGLDYGASYGCTSDDPAL----IVTRATEAAKFGEGASGWSGYSLLTNNCETFAYWCSTGRRV 235
            L+ + +    L PGD +Y YR      HHGI      V H+      G          H+     QV   +    GV    L+ FLKG  L R  Y  S  ST      S  C++ +       +V RAT+     EG   +  Y+LL NNCE FA +C TG+R+
Sbjct:    3 LFSNRIDRSLLKPGDHVYCYRNNHIYSHHGIYVGDNKVIHLTRTQVDG-----QNDNDHNPMISCQVCKHEPKRSGVVKCCLDCFLKGHKLFRFKYGIS--STQFVMNRSGTCSTGNCCYSRDDVVRRATDMLHSSEG---FGAYNLLNNNCEAFAVYCKTGKRL 157          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8787.17818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNF0_ECTSI1.090e-13466.76LRAT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JNU1_9PHAE4.020e-13366.38LRAT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6P5TMJ6_PRUAV2.330e-730.10HRAS-like suppressor 2 n=1 Tax=Prunus avium TaxID=... [more]
UPI000CED2AF91.460e-531.52lecithin retinol acyltransferase n=1 Tax=Morus not... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007053LRAT domainPFAMPF04970LRATcoord: 92..234
e-value: 2.1E-14
score: 53.9
NoneNo IPR availablePANTHERPTHR46137FAMILY NOT NAMEDcoord: 84..312
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 316..343
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..276
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..315
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 277..295
NoneNo IPR availableTMHMMTMhelixcoord: 249..271
NoneNo IPR availableTMHMMTMhelixcoord: 293..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8787contigL-elsbetiae_contig8787:2606..4801 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8787.17818.1mRNA_L-elsbetiae_contig8787.17818.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8787 1131..4816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8787.17818.1 ID=prot_L-elsbetiae_contig8787.17818.1|Name=mRNA_L-elsbetiae_contig8787.17818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=344bp
MNEMEETVTNEGSGNAVELTRWQQWRDTAEPATGLNTTTGIGGTGSAARP
IEIEDAAGTTATVAPGGARAEGGGGPLEETETLWGHAVHEHELSPGDQIY
VYRGAIQHHGIVTHVPGALPAGGVPAAAGMLPHSRAAGVQVVHFDSACDG
VESTSLESFLKGSTLRRATYAASAWSTGLDYGASYGCTSDDPALIVTRAT
EAAKFGEGASGWSGYSLLTNNCETFAYWCSTGRRVMALRQTLSRQATRGL
VGAGIVAAGASAVVSAGGLASAGVAATAFVPRGVRGVQRGVQALEWATGV
AVVAVAAADVVSTLVTRAPVARNINLPGGHTGGGRGRVGAVSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007053LRAT_dom