prot_L-elsbetiae_contig8780.17814.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8780.17814.1
Unique Nameprot_L-elsbetiae_contig8780.17814.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length374
Homology
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BLAST of mRNA_L-elsbetiae_contig8780.17814.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 9.440e-15
Identity = 78/179 (43.58%), Postives = 91/179 (50.84%), Query Frame = 0 
Query:  205 ADGERLPPVGRDFADQMSPSGLQAIKQISKLRDAQYLSA----KTQSSEEQXXXXXXXXXXXXXXXXXXSYAGSDGP---AGGRGQMWGRLGAAGEAYSLSXXXXXXXXXXXXXXXXXD----------------------AHESARATLSHLAAQVQAQEASRRSRAAGMDDGAGNGE 354
            ADGERLPPV R+FA+QMSPS LQAIKQISKLRDAQYLS     K  +S+E+                   Y  SDG      GRGQ W R    G AYSLS              XXX                       A +S+RATL  LAA+VQA+E SRR+R AG+ DG  +G+
Sbjct:  418 ADGERLPPVSREFAEQMSPSALQAIKQISKLRDAQYLSGRGRDKPSTSDEEQEPVLPMGPTPELAPAAGGYESSDGGHTGGAGRGQGW-RSAHRGGAYSLSLNNNSSNPRSAGGAXXXXXXXXXXXXXXXXXXXXXXGQDAAKDSSRATLGQLAAKVQAEEKSRRTR-AGVGDGVRDGD 594
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8780.17814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG60_ECTSI9.440e-1543.58Histone deactylase of possible bacterial origin wi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8780contigL-elsbetiae_contig8780:4889..7041 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8780.17814.1mRNA_L-elsbetiae_contig8780.17814.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8780 4888..7041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8780.17814.1 ID=prot_L-elsbetiae_contig8780.17814.1|Name=mRNA_L-elsbetiae_contig8780.17814.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=374bp
GTAVGRGLSEAYGGVGQQRQQQQQQQQQQQMPPQVDYYRSMVQQQQQQQQ
QQQQLSNAGYPAAATGYKPAPPRSPYRMNPTANPTVVAAATAAARTAAPQ
QQQQAASNAAWGQNSVAATATGGHHGNGTTATGGSSQHLQQQQQQQQQST
AATAPGAPPGSGGAVSTGPLTISAPAAVTATPNPGGDGAAAAAVGGNTGS
VLAPADGERLPPVGRDFADQMSPSGLQAIKQISKLRDAQYLSAKTQSSEE
QEAAAAGASAAAAQAAAVASYAGSDGPAGGRGQMWGRLGAAGEAYSLSLS
SSNNNNNNNNSSNSQDAHESARATLSHLAAQVQAQEASRRSRAAGMDDGA
GNGEDHDGGEDEGSGGGINGDNDS
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