prot_L-elsbetiae_contig8758.17796.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig8758.17796.1
Unique Name	prot_L-elsbetiae_contig8758.17796.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	431

Homology

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BLAST of mRNA_L-elsbetiae_contig8758.17796.1 vs. uniprot
Match: A0A6H5JLW9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW9_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 3.210e-39
Identity = 83/134 (61.94%), Postives = 101/134 (75.37%), Query Frame = 0

Query:  284 MEEWLESHARDPVPSAGAPPRRTLEQLLEGGLGEESEEEXXNGDEAEAETERKLQEHRDLSRRWVSSVTDAAGSQRTKKQLLKIGMLGYTRSVIAGGGPSRASPGRERLALAGLGSAALAGLVFRLLDRRIRDA 417
            M EWL++ AR+   +AGAPPR+TL+Q+LE  L E  E+E    DE EA    +LQEH+DL RRWVS  TD  GSQRTKKQLLKI MLGY RSVIAGGG + ASPGRERL  AG G+A L+G+V RLL++RI++A
Sbjct:    1 MSEWLKTQAREASAAAGAPPRKTLDQILEEVLSESDEDED---DEKEATLAERLQEHQDLGRRWVSGATDVVGSQRTKKQLLKIAMLGYARSVIAGGGATGASPGRERLLAAGFGAAVLSGVVCRLLEQRIQNA 131

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BLAST of mRNA_L-elsbetiae_contig8758.17796.1 vs. uniprot
Match: D7G1C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C8_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 5.400e-39
Identity = 86/137 (62.77%), Postives = 105/137 (76.64%), Query Frame = 0

Query:  281 GVGMEEWLESHARDPVPSAGAPPRRTLEQLLEGGLGEESEEEXXNGDEAEAETERKLQEHRDLSRRWVSSVTDAAGSQRTKKQLLKIGMLGYTRSVIAGGGPSRASPGRERLALAGLGSAALAGLVFRLLDRRIRDA 417
            G GM EWL++ AR+   +AGAPPR+TL+Q+LE GL E  E+E    DE EA    +LQEH+DL RRWVS  TD  GSQRTKKQLLKI MLGY RSVIAGGG + ASPGRERL  AG+G+A L+G+V RLL++RI++A
Sbjct:  340 GDGMSEWLKTQAREASAAAGAPPRKTLDQILEEGLSESDEDED---DEKEATLAERLQEHQDLGRRWVSGATDVVGSQRTKKQLLKIAMLGYARSVIAGGGATGASPGRERLLAAGVGAAVLSGVVCRLLEQRIQNA 473

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig8758.17796.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig8758.17796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JLW9_9PHAE	3.210e-39	61.94	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D7G1C8_ECTSI	5.400e-39	62.77	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 319..339
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 392..410
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..391
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 411..430

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig8758	contig	L-elsbetiae_contig8758:2918..7128 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig8758.17796.1	mRNA_L-elsbetiae_contig8758.17796.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig8758 2400..7651 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig8758.17796.1 ID=prot_L-elsbetiae_contig8758.17796.1|Name=mRNA_L-elsbetiae_contig8758.17796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=431bp
MSEMSEMSDDTGVRDATLDEGDDDDEQSSGGVSEMSQMLEMSEMSDDTGV
RDATLDEGDDDDEQISGDVSEMSEMSEMSDDTGVRDAALDEDGDDDEDED
EEGAAYAEGEGEGPEAAVEESGAESGKGVGGGAYDYDNDNVDADDDDDIN
GTVNDGTVNDDYDNDDVDADHDDDSNGTVNDGTVNDGTVNDDDYDDDDDA
DDNDDDTAAARAHAHGSPDAGTESDDGGELGTKIEDAGAEETGSETETET
ETETETQAEADAEAESGEDSGAETEGETGAGVGMEEWLESHARDPVPSAG
APPRRTLEQLLEGGLGEESEEEEENGDEAEAETERKLQEHRDLSRRWVSS
VTDAAGSQRTKKQLLKIGMLGYTRSVIAGGGPSRASPGRERLALAGLGSA
ALAGLVFRLLDRRIRDAGEKIIYKSLIIHM*